RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	TMEM33	P57088	247 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	LMO4	P61968	165 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	SNRPG	P62308	76 aa	Known RBP	13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	HOXA4	Q00056	320 aa	Predicted RBP	13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	LPCAT4	Q643R3	524 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF540	Q8NDQ6	660 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	OR13G1	Q8NGZ3	307 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	STMN2	Q93045	179 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	REEP6	Q96HR9	211 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	GCM1	Q9NP62	436 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	CLN6	Q9NWW5	311 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	WARS2	Q9UGM6	360 aa	Known RBP	13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	IL19	Q9UHD0	177 aa		13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	MRM2	Q9UI43	246 aa	Known RBP	13.75	□□□□□ -0.21
TMC6-223	ENST00000592594	WNK2	Q9Y3S1	2297 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	FAM157A	C9JC47	383 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	XRCC2	O43543	280 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	IGLV3-1	P01715	115 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	CA6	P23280	308 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	ACKR3	P25106	362 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	CHN2	P52757	468 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	CDC42	P60953	191 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	CXCR4	P61073	352 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	MVK	Q03426	396 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	SLC25A30	Q5SVS4	291 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF684	Q5T5D7	378 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	PLEKHG7	Q6ZR37	379 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	ENTHD1	Q8IYW4	607 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	APH1B	Q8WW43	257 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	CCL17	Q92583	94 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	PPP1R14A	Q96A00	147 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	RNF166	Q96A37	237 aa	Predicted RBP	13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	APOL4	Q9BPW4	351 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	EGLN1	Q9GZT9	426 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	FGF23	Q9GZV9	251 aa	Predicted RBP	13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	FAM118A	Q9NWS6	357 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594	ORC6	Q9Y5N6	252 aa		13.74	□□□□□ -0.21
TMC6-223	ENST00000592594		A0A1W2PQL4	384 aa	Predicted RBP	13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	CLDN25	C9JDP6	229 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594		J3QRE1	110 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	PTBP3	O95758	552 aa	Known RBP	13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	IGHV2-70	P01814	119 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF85	Q03923	595 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	OR8B8	Q15620	311 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	OCLN	Q16625	522 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	LRRC36	Q1X8D7	754 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	HFE	Q30201	348 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	DEGS2	Q6QHC5	323 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	KRT77	Q7Z794	578 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	WDR86	Q86TI4	376 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF679	Q8IYX0	411 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	OR52H1	Q8NGJ2	320 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	TRUB1	Q8WWH5	349 aa	Known RBP	13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	POM121	Q96HA1	1249 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	TBX5	Q99593	518 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	ADAT1	Q9BUB4	502 aa	Known RBP	13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	OPA3	Q9H6K4	179 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	TMEM106B	Q9NUM4	274 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	TMEM100	Q9NV29	134 aa		13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.73	□□□□□ -0.21
TMC6-223	ENST00000592594	LOC100289279	A0A1B0GTE1	492 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	GGT3P	A6NGU5	568 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	SLC16A6	O15403	523 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	TNFSF4	P23510	183 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	DCTD	P32321	178 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	CD200	P41217	278 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	GATA4	P43694	442 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	GSK3A	P49840	483 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	CDH15	P55291	814 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	ELF3	P78545	371 aa	Predicted RBP	13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	MPPED2	Q15777	294 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	TIGD6	Q17RP2	521 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	GFOD2	Q3B7J2	385 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	PRAMEF6	Q5VXH4	476 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	GALNT4	Q8N4A0	578 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	ASB17	Q8WXJ9	295 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	HPS1	Q92902	700 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	PGAM5	Q96HS1	289 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	OR10A2	Q9H208	303 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	NIPAL2	Q9H841	368 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	G6PC2	Q9NQR9	355 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	YAE1D1	Q9NRH1	226 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	IMPAD1	Q9NX62	359 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	MRPL15	Q9P015	296 aa	Known RBP	13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	GMPPB	Q9Y5P6	360 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	TMEM14A	Q9Y6G1	99 aa		13.72	□□□□□ -0.21
TMC6-223	ENST00000592594	MXRA5	Q9NR99	2828 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	LOC100130705	A0A1B0GUX0	176 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	ERICH4	A6NGS2	130 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	CASQ2	O14958	399 aa	Predicted RBP	13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	ZNF254	O75437	659 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	APOC1	P02654	83 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	TTR	P02766	147 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	GZMK	P49863	264 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	ISL1	P61371	349 aa		13.71	□□□□□ -0.21
TMC6-223	ENST00000592594	TMED1	Q13445	227 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms