RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 TMEM246Q9BRR3 403 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 SLC22A4Q9H015 551 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 NTN4Q9HB63 628 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 UFSP2Q9NUQ7 469 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
APOC1-208ENST00000592535 STAB1Q9NY15 2570 aa11.63□□□□□ -0.55
APOC1-208ENST00000592535 A0A0A6YYJ9 748 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 XRCC2O43543 280 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 SELENOFO60613 162 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 TIPRLO75663 272 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 ATP5HO75947 161 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 FSHBP01225 129 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 HMGN1P05114 100 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 ANXA2P07355 339 aaKnown RBP11.62□□□□□ -0.55
APOC1-208ENST00000592535 IRF2P14316 349 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 ZNF12P17014 697 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 HSD11B1P28845 292 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 SLC15A1P46059 708 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 HOXA4Q00056 320 aaPredicted RBP11.62□□□□□ -0.55
APOC1-208ENST00000592535 ZNF404Q494X3 552 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 TMEM236Q5W0B7 351 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 CCDC121Q6ZUS5 278 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 SHFQ7M4L6 423 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 KLBQ86Z14 1044 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 CPOQ8IVL8 374 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
APOC1-208ENST00000592535 C19orf18Q8NEA5 215 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 BBS1Q8NFJ9 593 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 OR11L1Q8NGX0 322 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 Q8TCH9 128 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 ZNF418Q8TF45 676 aaPredicted RBP11.62□□□□□ -0.55
APOC1-208ENST00000592535 ERGIC1Q969X5 290 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 SPSB4Q96A44 273 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 TOR3AQ9H497 397 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 SLC25A19Q9HC21 320 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 DNAJC27Q9NZQ0 273 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 MRPL15Q9P015 296 aaKnown RBP11.62□□□□□ -0.55
APOC1-208ENST00000592535 LRCH1Q9Y2L9 728 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 NOP16Q9Y3C1 178 aaKnown RBP11.62□□□□□ -0.55
APOC1-208ENST00000592535 PPIAL4AQ9Y536 164 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 INSIG2Q9Y5U4 225 aa11.62□□□□□ -0.55
APOC1-208ENST00000592535 PRODHO43272 600 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 GMDSO60547 372 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 OPRL1P41146 370 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 ZNF121P58317 390 aaPredicted RBP11.61□□□□□ -0.55
APOC1-208ENST00000592535 ZNF154Q13106 437 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 KLHL12Q53G59 568 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 FAM57BQ71RH2 274 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 SLC16A9Q7RTY1 509 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 PRSS45Q7RTY3 260 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 UTP4Q969X6 686 aaKnown RBP11.61□□□□□ -0.55
APOC1-208ENST00000592535 SGK3Q96BR1 496 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 NEIL1Q96FI4 390 aaPredicted RBP11.61□□□□□ -0.55
APOC1-208ENST00000592535 SLC6A7Q99884 636 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 SSBP3Q9BWW4 388 aaPredicted RBP11.61□□□□□ -0.55
APOC1-208ENST00000592535 OPA3Q9H6K4 179 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 BRD7Q9NPI1 651 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 MIOXQ9UGB7 285 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 OR5V1Q9UGF6 321 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 KLHDC2Q9Y2U9 406 aa11.61□□□□□ -0.55
APOC1-208ENST00000592535 FSTL3O95633 263 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 PTBP3O95758 552 aaKnown RBP11.6□□□□□ -0.55
APOC1-208ENST00000592535 LYNP07948 512 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 H2BFMP0C1H6 154 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 SLC2A5P22732 501 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 NAA10P41227 235 aaPredicted RBP11.6□□□□□ -0.55
APOC1-208ENST00000592535 HILS1P60008 231 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 RPS7P62081 194 aaKnown RBP11.6□□□□□ -0.55
APOC1-208ENST00000592535 GNB2P62879 340 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 FAM3AP98173 230 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 TIGD6Q17RP2 521 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 LYPD2Q6UXB3 125 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 OR8B3Q8NGG8 313 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 OTOSQ8NHW6 89 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 THEM6Q8WUY1 208 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 C22orf15Q8WYQ4 148 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 NRBF2Q96F24 287 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 REEP6Q96HR9 211 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 PLEKHA8Q96JA3 519 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 OR8B2Q96RD0 313 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 FN3KRPQ9HA64 309 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 KIF17Q9P2E2 1029 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 ZNF319Q9P2F9 582 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 RNF7Q9UBF6 113 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 AUP1Q9Y679 476 aa11.6□□□□□ -0.55
APOC1-208ENST00000592535 hCG_38984A0A1B0GV85 526 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 ANKRD30BLA7E2S9 258 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 APOC1P02654 83 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 GRPP07492 148 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 CPT2P23786 658 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 CD80P33681 288 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 DDOSTP39656 456 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 DAPP51397 102 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 CRISP1P54107 249 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 PAX2Q02962 417 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 GFOD2Q3B7J2 385 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 ARMCX4Q5H9R4 360 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 KLF17Q5JT82 389 aaPredicted RBP11.59□□□□□ -0.55
APOC1-208ENST00000592535 SLC35D3Q5M8T2 416 aa11.59□□□□□ -0.55
APOC1-208ENST00000592535 FAHD1Q6P587 224 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms