RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 GID4Q8IVV7 300 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 NPEPL1Q8NDH3 523 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ABHD4Q8TB40 342 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 FANK1Q8TC84 345 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 KLF14Q8TD94 323 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 HAVCR2Q8TDQ0 301 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 TMEM255BQ8WV15 326 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ASB10Q8WXI3 467 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 MYDGFQ969H8 173 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 SLC25A28Q96A46 364 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 MARS2Q96GW9 593 aaKnown RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 POM121L2Q96KW2 1035 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 CNBD2Q96M20 576 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 ALG12Q9BV10 488 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 C20orf141Q9NUB4 165 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 NUP50Q9UKX7 468 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 RPL36Q9Y3U8 105 aaKnown RBP7.98□□□□□ -1.13
BRCA1-226ENST00000591534 NPTNQ9Y639 398 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 AUP1Q9Y679 476 aa7.98□□□□□ -1.13
BRCA1-226ENST00000591534 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 A0A087WXM4 84 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 EFCAB10A6NFE3 127 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 A6NIZ1 184 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 ZAR1LA6NP61 321 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 C12orf71A8MTZ7 269 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 IFNL4K9M1U5 179 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 XKRYO14609 159 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 ARPC3O15145 178 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 TIMM8AO60220 97 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PSPNO60542 156 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 IGHMP01871 453 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 CST2P09228 141 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SBK2P0C263 348 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF32P17041 273 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 MAKP20794 623 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PRKACGP22612 351 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 POU1F1P28069 291 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 GRK5P34947 590 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 RPL4P36578 427 aaKnown RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 AQP2P41181 271 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 MTNR1AP48039 350 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 RAP1BP61224 184 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PPP1CBP62140 327 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SNRPGP62308 76 aaKnown RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 RAP1AP62834 184 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 IL13RA1P78552 427 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 TNFAIP6P98066 277 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 BAMBIQ13145 260 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PTGES3Q15185 160 aaKnown RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 TMEM155Q4W5P6 130 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 KLHL22Q53GT1 634 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SPATA46Q5T0L3 261 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SLX4IPQ5VYV7 408 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 DNM1P34Q6PK57 102 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PTCHD4Q6ZW05 846 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 DOK3Q7L591 496 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 ADCK1Q86TW2 530 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 MUC20Q8N307 709 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 ZDHHC22Q8N966 263 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 OR9Q2Q8NGE9 314 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SLC25A40Q8TBP6 338 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 C4orf45Q96LM5 186 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 ZNF570Q96NI8 536 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 GPX7Q96SL4 187 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 OR2J1Q9GZK6 312 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 TXNIPQ9H3M7 391 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 C19orf73Q9NVV2 129 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 CHCHD3Q9NX63 227 aaKnown RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PLEK2Q9NYT0 353 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 CNOT2Q9NZN8 540 aaKnown RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 NDUFA13Q9P0J0 144 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 OR5V1Q9UGF6 321 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PURGQ9UJV8 347 aaKnown RBP7.97□□□□□ -1.13
BRCA1-226ENST00000591534 PPIAL4AQ9Y536 164 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SNX5Q9Y5X3 404 aa7.97□□□□□ -1.13
BRCA1-226ENST00000591534 SLC2A10O95528 541 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 ABHD16AO95870 558 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 RPSAP08865 295 aaKnown RBP7.96□□□□□ -1.14
BRCA1-226ENST00000591534 EEF1B2P24534 225 aaKnown RBP7.96□□□□□ -1.14
BRCA1-226ENST00000591534 CDAP32320 146 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 ERVK-25P63136 954 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 CDK5Q00535 292 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 PSG4Q00888 419 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF154Q13106 437 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 SEC23BQ15437 767 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 SNAPC1Q16533 368 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 ESCO2Q56NI9 601 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 ALG10Q5BKT4 473 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 LCN1P1Q5VSP4 162 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 BTNL3Q6UXE8 466 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 TMEM179BQ7Z7N9 219 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF101Q8IZC7 436 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 LNX2Q8N448 690 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 SIGLECL1Q8N7X8 197 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 AKR7LQ8NHP1 331 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 FAM81AQ8TBF8 368 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 C22orf15Q8WYQ4 148 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 NSMAFQ92636 917 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 FCGR1BQ92637 280 aa7.96□□□□□ -1.14
BRCA1-226ENST00000591534 SAMD8Q96LT4 415 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms