RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZNF205O95201 554 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 SBK2P0C263 348 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 PEX2P28328 305 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 RAD23AP54725 363 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 TMEM33P57088 247 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 CXCR4P61073 352 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 FAM3AP98173 230 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 MFGE8Q08431 387 aaPredicted RBP9.73□□□□□ -0.85
VMP1-211ENST00000591315 TIGD6Q17RP2 521 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 FAM201AQ5SY85 155 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 MOGAT3Q86VF5 341 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.73□□□□□ -0.85
VMP1-211ENST00000591315 OR8B12Q8NGG6 310 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 SPSB4Q96A44 273 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 REEP6Q96HR9 211 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 MEGF10Q96KG7 1140 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 OR8B4Q96RC9 309 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 EGLN1Q9GZT9 426 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 CGGBP1Q9UFW8 167 aaPredicted RBP9.73□□□□□ -0.85
VMP1-211ENST00000591315 MRM2Q9UI43 246 aaKnown RBP9.73□□□□□ -0.85
VMP1-211ENST00000591315 IKZF2Q9UKS7 526 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 WIPI2Q9Y4P8 454 aa9.73□□□□□ -0.85
VMP1-211ENST00000591315 hCG_38984A0A1B0GV85 526 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 A0A1B0GWJ7 208 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 FAM157AC9JC47 383 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 CLIC3O95833 236 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 PNPP00491 289 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 GABRB1P18505 474 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 ACKR3P25106 362 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 HTR1FP30939 366 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 CHN2P52757 468 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 PSMA6P60900 246 aaKnown RBP9.72□□□□□ -0.85
VMP1-211ENST00000591315 CDC42P60953 191 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 LMO4P61968 165 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 ROM1Q03395 351 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 MAB21L1Q13394 359 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 MPPED2Q15777 294 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 HFEQ30201 348 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 ZMAT1Q5H9K5 638 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 C6orf52Q5T4I8 152 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 PRAMEF6Q5VXH4 476 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 CYB5R2Q6BCY4 276 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 ZNF322Q6U7Q0 402 aaPredicted RBP9.72□□□□□ -0.85
VMP1-211ENST00000591315 GID4Q8IVV7 300 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 ZNF540Q8NDQ6 660 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 SIGLEC11Q96RL6 698 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 DIRC2Q96SL1 478 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 OR10A2Q9H208 303 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 LPAR2Q9HBW0 351 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 GCM1Q9NP62 436 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 FAM118AQ9NWS6 357 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 FAM206AQ9NX38 181 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 IMPAD1Q9NX62 359 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 HAO2Q9NYQ3 351 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 NKX1-2Q9UD57 310 aaPredicted RBP9.72□□□□□ -0.85
VMP1-211ENST00000591315 WARS2Q9UGM6 360 aaKnown RBP9.72□□□□□ -0.85
VMP1-211ENST00000591315 GMPPBQ9Y5P6 360 aa9.72□□□□□ -0.85
VMP1-211ENST00000591315 LOC100289279A0A1B0GTE1 492 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 LOC100130705A0A1B0GUX0 176 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 TMEM269A0A1B0GVZ9 245 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 A0A1W2PQL4 384 aaPredicted RBP9.71□□□□□ -0.86
VMP1-211ENST00000591315 CLDN25C9JDP6 229 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 SRSF10O75494 262 aaKnown RBP9.71□□□□□ -0.86
VMP1-211ENST00000591315 CYB5R3P00387 301 aaPredicted RBP9.71□□□□□ -0.86
VMP1-211ENST00000591315 TNFSF4P23510 183 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 GSK3AP49840 483 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 MMP16P51512 607 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 SNRPGP62308 76 aaKnown RBP9.71□□□□□ -0.86
VMP1-211ENST00000591315 ZNF85Q03923 595 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 OR8G1Q15617 311 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 DMRTC1Q5HYR2 192 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 RHOUQ7L0Q8 258 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 ENTHD1Q8IYW4 607 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 ZNF679Q8IYX0 411 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 C19orf18Q8NEA5 215 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 OR10H4Q8NGA5 316 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 ADAT1Q9BUB4 502 aaKnown RBP9.71□□□□□ -0.86
VMP1-211ENST00000591315 FGF23Q9GZV9 251 aaPredicted RBP9.71□□□□□ -0.86
VMP1-211ENST00000591315 AMBNQ9NP70 447 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 UFSP2Q9NUQ7 469 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 CLN6Q9NWW5 311 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 IL19Q9UHD0 177 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 PPP1R3CQ9UQK1 317 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 RHBDD3Q9Y3P4 386 aa9.71□□□□□ -0.86
VMP1-211ENST00000591315 ATRQ13535 2644 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 DOCK11Q5JSL3 2073 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 ISPDA4D126 451 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 ZNF670-ZNF695F2Z2N8 137 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 H3BSH0 61 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 XRCC2O43543 280 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 RPP14O95059 124 aaKnown RBP9.7□□□□□ -0.86
VMP1-211ENST00000591315 TGFAP01135 160 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 GZMKP49863 264 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 ELF3P78545 371 aaPredicted RBP9.7□□□□□ -0.86
VMP1-211ENST00000591315 ZMYND11Q15326 602 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 OCLNQ16625 522 aa9.7□□□□□ -0.86
VMP1-211ENST00000591315 ZNF684Q5T5D7 378 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms