RNA–Protein interactions for RNA: ENST00000590181.5

LIG3-212, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,156 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-212ENST00000590181 PHYHO14832 338 aa8.83□□□□□ -1
LIG3-212ENST00000590181 WNT9BO14905 357 aa8.83□□□□□ -1
LIG3-212ENST00000590181 GPANK1O95872 356 aa8.83□□□□□ -1
LIG3-212ENST00000590181 LIPFP07098 398 aa8.83□□□□□ -1
LIG3-212ENST00000590181 ATP6V1B1P15313 513 aa8.83□□□□□ -1
LIG3-212ENST00000590181 FASP25445 335 aa8.83□□□□□ -1
LIG3-212ENST00000590181 POU1F1P28069 291 aa8.83□□□□□ -1
LIG3-212ENST00000590181 CFHR2P36980 270 aa8.83□□□□□ -1
LIG3-212ENST00000590181 CRISP1P54107 249 aa8.83□□□□□ -1
LIG3-212ENST00000590181 EIF2B1Q14232 305 aaKnown RBP8.83□□□□□ -1
LIG3-212ENST00000590181 AVPI1Q5T686 147 aa8.83□□□□□ -1
LIG3-212ENST00000590181 CD276Q5ZPR3 534 aa8.83□□□□□ -1
LIG3-212ENST00000590181 FAHD1Q6P587 224 aa8.83□□□□□ -1
LIG3-212ENST00000590181 LRRN1Q6UXK5 716 aa8.83□□□□□ -1
LIG3-212ENST00000590181 DCDC5Q6ZRR9 648 aa8.83□□□□□ -1
LIG3-212ENST00000590181 DPY19L4Q7Z388 723 aa8.83□□□□□ -1
LIG3-212ENST00000590181 TIGD4Q8IY51 512 aa8.83□□□□□ -1
LIG3-212ENST00000590181 ZNF511Q8NB15 262 aa8.83□□□□□ -1
LIG3-212ENST00000590181 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
LIG3-212ENST00000590181 OR9Q1Q8NGQ5 310 aa8.83□□□□□ -1
LIG3-212ENST00000590181 GTF3AQ92664 365 aaKnown RBP8.83□□□□□ -1
LIG3-212ENST00000590181 UTP4Q969X6 686 aaKnown RBP8.83□□□□□ -1
LIG3-212ENST00000590181 SIGLEC11Q96RL6 698 aa8.83□□□□□ -1
LIG3-212ENST00000590181 MYCBPQ99417 103 aaPredicted RBP8.83□□□□□ -1
LIG3-212ENST00000590181 MRI1Q9BV20 369 aa8.83□□□□□ -1
LIG3-212ENST00000590181 ABHD6Q9BV23 337 aa8.83□□□□□ -1
LIG3-212ENST00000590181 SUCNR1Q9BXA5 334 aa8.83□□□□□ -1
LIG3-212ENST00000590181 POFUT1Q9H488 388 aa8.83□□□□□ -1
LIG3-212ENST00000590181 NARFLQ9H6Q4 476 aa8.83□□□□□ -1
LIG3-212ENST00000590181 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
LIG3-212ENST00000590181 NTN4Q9HB63 628 aa8.83□□□□□ -1
LIG3-212ENST00000590181 CENPMQ9NSP4 180 aa8.83□□□□□ -1
LIG3-212ENST00000590181 VNN3Q9NY84 501 aa8.83□□□□□ -1
LIG3-212ENST00000590181 H2AFY2Q9P0M6 372 aaPredicted RBP8.83□□□□□ -1
LIG3-212ENST00000590181 PPIAL4AQ9Y536 164 aa8.83□□□□□ -1
LIG3-212ENST00000590181 AP4S1Q9Y587 144 aa8.83□□□□□ -1
LIG3-212ENST00000590181 TRRAPQ9Y4A5 3859 aa8.83□□□□□ -1
LIG3-212ENST00000590181 TRAV38-1A0A0B4J264 116 aa8.82□□□□□ -1
LIG3-212ENST00000590181 TVP23AA6NH52 213 aa8.82□□□□□ -1
LIG3-212ENST00000590181 G3V2T6 193 aa8.82□□□□□ -1
LIG3-212ENST00000590181 GPR37O15354 613 aa8.82□□□□□ -1
LIG3-212ENST00000590181 VENTXO95231 258 aa8.82□□□□□ -1
LIG3-212ENST00000590181 LYNP07948 512 aa8.82□□□□□ -1
LIG3-212ENST00000590181 WNT2P09544 360 aa8.82□□□□□ -1
LIG3-212ENST00000590181 H2BFMP0C1H6 154 aa8.82□□□□□ -1
LIG3-212ENST00000590181 OPRL1P41146 370 aa8.82□□□□□ -1
LIG3-212ENST00000590181 MMP16P51512 607 aa8.82□□□□□ -1
LIG3-212ENST00000590181 IL5RAQ01344 420 aa8.82□□□□□ -1
LIG3-212ENST00000590181 ZNF92Q03936 586 aa8.82□□□□□ -1
LIG3-212ENST00000590181 PPP1R8Q12972 351 aaKnown RBP8.82□□□□□ -1
LIG3-212ENST00000590181 TMED1Q13445 227 aa8.82□□□□□ -1
LIG3-212ENST00000590181 ZMYND11Q15326 602 aa8.82□□□□□ -1
LIG3-212ENST00000590181 ATP6AP1Q15904 470 aa8.82□□□□□ -1
LIG3-212ENST00000590181 SNAPC1Q16533 368 aa8.82□□□□□ -1
LIG3-212ENST00000590181 TIGD6Q17RP2 521 aa8.82□□□□□ -1
LIG3-212ENST00000590181 ZNF404Q494X3 552 aa8.82□□□□□ -1
LIG3-212ENST00000590181 C1orf146Q5VVC0 180 aa8.82□□□□□ -1
LIG3-212ENST00000590181 BTNL3Q6UXE8 466 aa8.82□□□□□ -1
LIG3-212ENST00000590181 KRT74Q7RTS7 529 aa8.82□□□□□ -1
LIG3-212ENST00000590181 SLC16A9Q7RTY1 509 aa8.82□□□□□ -1
LIG3-212ENST00000590181 ERI1Q8IV48 349 aaKnown RBP8.82□□□□□ -1
LIG3-212ENST00000590181 CPOQ8IVL8 374 aa8.82□□□□□ -1
LIG3-212ENST00000590181 OR5AS1Q8N127 324 aa8.82□□□□□ -1
LIG3-212ENST00000590181 OR51L1Q8NGJ5 315 aa8.82□□□□□ -1
LIG3-212ENST00000590181 OR6N2Q8NGY6 317 aa8.82□□□□□ -1
LIG3-212ENST00000590181 SGMS2Q8NHU3 365 aa8.82□□□□□ -1
LIG3-212ENST00000590181 NEIL1Q96FI4 390 aaPredicted RBP8.82□□□□□ -1
LIG3-212ENST00000590181 TEAD3Q99594 435 aa8.82□□□□□ -1
LIG3-212ENST00000590181 MROQ9BYG7 248 aa8.82□□□□□ -1
LIG3-212ENST00000590181 OCEL1Q9H607 264 aa8.82□□□□□ -1
LIG3-212ENST00000590181 ZMAT3Q9HA38 289 aaKnown RBP8.82□□□□□ -1
LIG3-212ENST00000590181 RNPEPL1Q9HAU8 725 aa8.82□□□□□ -1
LIG3-212ENST00000590181 TMEM165Q9HC07 324 aa8.82□□□□□ -1
LIG3-212ENST00000590181 HAO2Q9NYQ3 351 aa8.82□□□□□ -1
LIG3-212ENST00000590181 UBAP1Q9NZ09 502 aa8.82□□□□□ -1
LIG3-212ENST00000590181 RNF7Q9UBF6 113 aa8.82□□□□□ -1
LIG3-212ENST00000590181 OR5V1Q9UGF6 321 aa8.82□□□□□ -1
LIG3-212ENST00000590181 MPC1Q9Y5U8 109 aa8.82□□□□□ -1
LIG3-212ENST00000590181 CACNG2Q9Y698 323 aa8.82□□□□□ -1
LIG3-212ENST00000590181 A0A0U1RQV5 110 aa8.81□□□□□ -1
LIG3-212ENST00000590181 SLC22A31A6NKX4 558 aa8.81□□□□□ -1
LIG3-212ENST00000590181 ANXA2P2A6NMY6 339 aa8.81□□□□□ -1
LIG3-212ENST00000590181 MLNRO43193 412 aa8.81□□□□□ -1
LIG3-212ENST00000590181 CIB2O75838 187 aa8.81□□□□□ -1
LIG3-212ENST00000590181 ECDO95905 644 aaPredicted RBP8.81□□□□□ -1
LIG3-212ENST00000590181 GYPBP06028 91 aa8.81□□□□□ -1
LIG3-212ENST00000590181 ANXA2P07355 339 aaKnown RBP8.81□□□□□ -1
LIG3-212ENST00000590181 MUC1P15941 1255 aaPredicted RBP8.81□□□□□ -1
LIG3-212ENST00000590181 ZNF12P17014 697 aa8.81□□□□□ -1
LIG3-212ENST00000590181 EGR1P18146 543 aa8.81□□□□□ -1
LIG3-212ENST00000590181 NAA10P41227 235 aaPredicted RBP8.81□□□□□ -1
LIG3-212ENST00000590181 CX3CR1P49238 355 aa8.81□□□□□ -1
LIG3-212ENST00000590181 ROM1Q03395 351 aa8.81□□□□□ -1
LIG3-212ENST00000590181 PTGES3Q15185 160 aaKnown RBP8.81□□□□□ -1
LIG3-212ENST00000590181 ZBTB37Q5TC79 503 aa8.81□□□□□ -1
LIG3-212ENST00000590181 ZFP1Q6P2D0 407 aa8.81□□□□□ -1
LIG3-212ENST00000590181 PLBD1Q6P4A8 553 aa8.81□□□□□ -1
LIG3-212ENST00000590181 EGFL6Q8IUX8 553 aa8.81□□□□□ -1
LIG3-212ENST00000590181 C3orf56Q8N813 242 aa8.81□□□□□ -1
LIG3-212ENST00000590181 BHLHE23Q8NDY6 225 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms