RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 C1orf87Q8N0U7 546 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 TCEANCQ8N8B7 351 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 BOLLQ8N9W6 283 aaKnown RBP10.17□□□□□ -0.78
TPM4-212ENST00000590180 OR56B2PQ8NGI1 322 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 CENPNQ96H22 339 aaPredicted RBP10.17□□□□□ -0.78
TPM4-212ENST00000590180 REEP6Q96HR9 211 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 SIGLEC11Q96RL6 698 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 PRRG3Q9BZD7 231 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 OR10A2Q9H208 303 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 PATZ1Q9HBE1 687 aaKnown RBP10.17□□□□□ -0.78
TPM4-212ENST00000590180 TMEM165Q9HC07 324 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 LAMP5Q9UJQ1 280 aa10.17□□□□□ -0.78
TPM4-212ENST00000590180 PPIAL4EA0A075B759 164 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 A0A0G2JMP0 313 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 A0A0X1KG70 313 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 SAC3D1A6NKF1 404 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 ANKRD30BLA7E2S9 258 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 PPIAL4DF5H284 164 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 EBAG9O00559 213 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 PHF1O43189 567 aaPredicted RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 PRKYO43930 277 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 GMDSO60547 372 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 FOXH1O75593 365 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 GRPP07492 148 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 MRPL3P09001 348 aaKnown RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 PPIAL4FP0DN26 164 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 SLC2A5P22732 501 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 DDOSTP39656 456 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 CD200P41217 278 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 FAM201AQ5SY85 155 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 LCN1P1Q5VSP4 162 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 DCAF12L2Q5VW00 463 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 PRAMEF6Q5VXH4 476 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 KDM4DQ6B0I6 523 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 LRRN1Q6UXK5 716 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 MEPCEQ7L2J0 689 aaKnown RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 SLC16A9Q7RTY1 509 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 BCDIN3DQ7Z5W3 292 aaKnown RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 MUC20Q8N307 709 aaPredicted RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 CELF2-AS1Q8N7Q2 184 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 SPERTQ8NA61 448 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 DEFB108BQ8NET1 73 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 OR4M2Q8NGB6 313 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 OR52H1Q8NGJ2 320 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 PYDC1Q8WXC3 89 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 DVL3Q92997 716 aaPredicted RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 ERGIC1Q969X5 290 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 IL4I1Q96RQ9 567 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 YIPF3Q9GZM5 350 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 OPA3Q9H6K4 179 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 C7orf69Q9H7B7 122 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 METTL17Q9H7H0 456 aaPredicted RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 MRPL15Q9P015 296 aaKnown RBP10.16□□□□□ -0.78
TPM4-212ENST00000590180 ENOPH1Q9UHY7 261 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 PPIAL4AQ9Y536 164 aa10.16□□□□□ -0.78
TPM4-212ENST00000590180 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.15□□□□□ -0.78
TPM4-212ENST00000590180 A0A1B0GWJ7 208 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 M0R129 80 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 PNPP00491 289 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 ALOX5APP20292 161 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 CFL1P23528 166 aaKnown RBP10.15□□□□□ -0.78
TPM4-212ENST00000590180 ZFP36P26651 326 aaKnown RBP10.15□□□□□ -0.78
TPM4-212ENST00000590180 EPHA2P29317 976 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 THBS2P35442 1172 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 GATA4P43694 442 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 FAM3AP98173 230 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 MZT1Q08AG7 82 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 MPPED2Q15777 294 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 ZNF181Q2M3W8 571 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 SLX4IPQ5VYV7 408 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 KCTD18Q6PI47 426 aaPredicted RBP10.15□□□□□ -0.78
TPM4-212ENST00000590180 PRSS45Q7RTY3 260 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 OR8S1Q8NH09 359 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 TMEM158Q8WZ71 300 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 SPSB4Q96A44 273 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 ADAT1Q9BUB4 502 aaKnown RBP10.15□□□□□ -0.78
TPM4-212ENST00000590180 GABARAPL1Q9H0R8 117 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 RIBC2Q9H4K1 309 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 FN3KRPQ9HA64 309 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 G6PC2Q9NQR9 355 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 ZNF319Q9P2F9 582 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 RNF7Q9UBF6 113 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 OAZ3Q9UMX2 235 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 KLHDC2Q9Y2U9 406 aa10.15□□□□□ -0.78
TPM4-212ENST00000590180 LOC105371242A0A075B767 164 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 CCDC182A6NF36 153 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 A6NLC8 198 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 ZAR1LA6NP61 321 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 CEACAM18A8MTB9 384 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 PSMD9O00233 223 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 FAM20BO75063 409 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 AVPP01185 164 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 WNT2P09544 360 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 RPS2P15880 293 aaKnown RBP10.14□□□□□ -0.79
TPM4-212ENST00000590180 POLR2IP36954 125 aaKnown RBP10.14□□□□□ -0.79
TPM4-212ENST00000590180 GNALP38405 381 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 GSK3AP49840 483 aa10.14□□□□□ -0.79
TPM4-212ENST00000590180 ACTR3P61158 418 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms