RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 FAM20BO75063 409 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 FSTL3O95633 263 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 RPS2P15880 293 aaKnown RBP17.24■□□□□ 0.35
CIRBP-226ENST00000590171 HSD11B1P28845 292 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 ZNF404Q494X3 552 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 TMEM236Q5W0B7 351 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 SHFQ7M4L6 423 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 OR56B2PQ8NGI1 322 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 ERGIC1Q969X5 290 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 SPSB4Q96A44 273 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 OPA3Q9H6K4 179 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 MRPL15Q9P015 296 aaKnown RBP17.24■□□□□ 0.35
CIRBP-226ENST00000590171 LRCH1Q9Y2L9 728 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 NOP16Q9Y3C1 178 aaKnown RBP17.24■□□□□ 0.35
CIRBP-226ENST00000590171 PPIAL4AQ9Y536 164 aa17.24■□□□□ 0.35
CIRBP-226ENST00000590171 TBX1O43435 398 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 GMDSO60547 372 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 SELENOFO60613 162 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 TIPRLO75663 272 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 PTBP3O95758 552 aaKnown RBP17.23■□□□□ 0.35
CIRBP-226ENST00000590171 HMGN1P05114 100 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 ANXA2P07355 339 aaKnown RBP17.23■□□□□ 0.35
CIRBP-226ENST00000590171 IRF2P14316 349 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 ZNF12P17014 697 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 OPRL1P41146 370 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 HOXA4Q00056 320 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-226ENST00000590171 ZNF154Q13106 437 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 PRSS45Q7RTY3 260 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 KLBQ86Z14 1044 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 CPOQ8IVL8 374 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 OR11L1Q8NGX0 322 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 ZNF418Q8TF45 676 aaPredicted RBP17.23■□□□□ 0.35
CIRBP-226ENST00000590171 SLC25A19Q9HC21 320 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 DNAJC27Q9NZQ0 273 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 INSIG2Q9Y5U4 225 aa17.23■□□□□ 0.35
CIRBP-226ENST00000590171 PRODHO43272 600 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 ZNF121P58317 390 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-226ENST00000590171 KLHL12Q53G59 568 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 FAM57BQ71RH2 274 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 SLC16A9Q7RTY1 509 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-226ENST00000590171 C19orf18Q8NEA5 215 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 BBS1Q8NFJ9 593 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 OTOSQ8NHW6 89 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 UTP4Q969X6 686 aaKnown RBP17.22■□□□□ 0.35
CIRBP-226ENST00000590171 SGK3Q96BR1 496 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 NEIL1Q96FI4 390 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-226ENST00000590171 SSBP3Q9BWW4 388 aaPredicted RBP17.22■□□□□ 0.35
CIRBP-226ENST00000590171 MIOXQ9UGB7 285 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 OR5V1Q9UGF6 321 aa17.22■□□□□ 0.35
CIRBP-226ENST00000590171 ARHGAP32A7KAX9 2087 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 LYNP07948 512 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 CPT2P23786 658 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 HILS1P60008 231 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 FAM3AP98173 230 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 PAX2Q02962 417 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 TIGD6Q17RP2 521 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 FAHD1Q6P587 224 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 LYPD2Q6UXB3 125 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 USP43Q70EL4 1123 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 RHOUQ7L0Q8 258 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 NRBF2Q96F24 287 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 REEP6Q96HR9 211 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 SLC6A7Q99884 636 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 FN3KRPQ9HA64 309 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 KIF17Q9P2E2 1029 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 ZNF319Q9P2F9 582 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 KLHDC2Q9Y2U9 406 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 AUP1Q9Y679 476 aa17.21■□□□□ 0.35
CIRBP-226ENST00000590171 hCG_38984A0A1B0GV85 526 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 APOC1P02654 83 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 H2BFMP0C1H6 154 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 SLC2A5P22732 501 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 DDOSTP39656 456 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 NAA10P41227 235 aaPredicted RBP17.2■□□□□ 0.34
CIRBP-226ENST00000590171 DAPP51397 102 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 GNB2P62879 340 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 SLC35D3Q5M8T2 416 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 SPERTQ8NA61 448 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 PLPP7Q8NBV4 271 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 OR8B3Q8NGG8 313 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 THEM6Q8WUY1 208 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 DNAJC9Q8WXX5 260 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 C22orf15Q8WYQ4 148 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 PLEKHA8Q96JA3 519 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 OR8B2Q96RD0 313 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 SP140LQ9H930 580 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 BRD7Q9NPI1 651 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 PAPOLBQ9NRJ5 636 aaKnown RBP17.2■□□□□ 0.34
CIRBP-226ENST00000590171 RNF7Q9UBF6 113 aa17.2■□□□□ 0.34
CIRBP-226ENST00000590171 CRISP1P54107 249 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 RPS7P62081 194 aaKnown RBP17.19■□□□□ 0.34
CIRBP-226ENST00000590171 GFOD2Q3B7J2 385 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 ARMCX4Q5H9R4 360 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 DCDC5Q6ZRR9 648 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 ZNF454Q8N9F8 522 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 OR52H1Q8NGJ2 320 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 ZFAND2BQ8WV99 257 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 MRI1Q9BV20 369 aa17.19■□□□□ 0.34
CIRBP-226ENST00000590171 SUCNR1Q9BXA5 334 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms