RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.44□□□□□ -1.229e-12■■■■□ 24.7
SDF2-207ENST00000588472 A0A0G2JMP0 313 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 A0A0X1KG70 313 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 EBAG9O00559 213 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 PRKYO43930 277 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 AVPP01185 164 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 LYNP07948 512 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 ZFP36P26651 326 aaKnown RBP7.44□□□□□ -1.22
SDF2-207ENST00000588472 EPHA2P29317 976 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 OTX1P32242 354 aaPredicted RBP7.44□□□□□ -1.22
SDF2-207ENST00000588472 PMELP40967 661 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 SEC61A1P61619 476 aaKnown RBP7.44□□□□□ -1.22
SDF2-207ENST00000588472 MAB21L1Q13394 359 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 MPPED2Q15777 294 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 ZSCAN26Q16670 478 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 FAHD1Q6P587 224 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 LRRN1Q6UXK5 716 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 CCDC121Q6ZUS5 278 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 BCDIN3DQ7Z5W3 292 aaKnown RBP7.44□□□□□ -1.22
SDF2-207ENST00000588472 KRT77Q7Z794 578 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 ZDHHC13Q8IUH4 622 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 SPICQ8N5J4 248 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 OR4M2Q8NGB6 313 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 OR56B2PQ8NGI1 322 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 OR11L1Q8NGX0 322 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 RNF133Q8WVZ7 376 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 PYDC1Q8WXC3 89 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 SGK3Q96BR1 496 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 REEP6Q96HR9 211 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 SIGLEC11Q96RL6 698 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 OR10A2Q9H208 303 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 MMADHCQ9H3L0 296 aaPredicted RBP7.44□□□□□ -1.22
SDF2-207ENST00000588472 TOR3AQ9H497 397 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 C7orf69Q9H7B7 122 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 SLC25A19Q9HC21 320 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 LAMP5Q9UJQ1 280 aa7.44□□□□□ -1.22
SDF2-207ENST00000588472 TANC2Q9HCD6 1990 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PPIAL4EA0A075B759 164 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 hCG_1807616A0A1W2PRN6 198 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 SAC3D1A6NKF1 404 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 A6NLC8 198 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 ANKRD30BLA7E2S9 258 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 CEACAM18A8MTB9 384 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PPIAL4DF5H284 164 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PRODHO43272 600 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 XRCC2O43543 280 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 FAM20BO75063 409 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 FOXH1O75593 365 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 APOC1P02654 83 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PPIAL4FP0DN26 164 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 FCGR1AP12314 374 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 RPS2P15880 293 aaKnown RBP7.43□□□□□ -1.22
SDF2-207ENST00000588472 MDH2P40926 338 aaKnown RBP7.43□□□□□ -1.22
SDF2-207ENST00000588472 OPRL1P41146 370 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 ESRRGP62508 458 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 POU4F2Q12837 409 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 KRTAP24-1Q3LI83 254 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 SLC35D3Q5M8T2 416 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 SFRP4Q6FHJ7 346 aaPredicted RBP7.43□□□□□ -1.22
SDF2-207ENST00000588472 SLC16A9Q7RTY1 509 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 TCEANCQ8N8B7 351 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 OR8S1Q8NH09 359 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 OTOSQ8NHW6 89 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 DNAJC9Q8WXX5 260 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 IL4I1Q96RQ9 567 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 TEAD3Q99594 435 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 TMEM246Q9BRR3 403 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 RIBC2Q9H4K1 309 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PPP1R3EQ9H7J1 279 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 SP140LQ9H930 580 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 MARCH7Q9H992 704 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 FN3KRPQ9HA64 309 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PATZ1Q9HBE1 687 aaKnown RBP7.43□□□□□ -1.22
SDF2-207ENST00000588472 TMEM165Q9HC07 324 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 G6PC2Q9NQR9 355 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 MMP26Q9NRE1 261 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 C1orf123Q9NWV4 160 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 H2AFY2Q9P0M6 372 aaPredicted RBP7.43□□□□□ -1.22
SDF2-207ENST00000588472 ZNF319Q9P2F9 582 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 PPIAL4AQ9Y536 164 aa7.43□□□□□ -1.22
SDF2-207ENST00000588472 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.42□□□□□ -1.22
SDF2-207ENST00000588472 C3orf80F5H4A9 247 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 TRAPPC2LH3BP13 241 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 IFNL4K9M1U5 179 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 TCF21O43680 179 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 GMDSO60547 372 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 SLC2A5P22732 501 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 CD80P33681 288 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 POLR2IP36954 125 aaKnown RBP7.42□□□□□ -1.22
SDF2-207ENST00000588472 GNALP38405 381 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 CD200P41217 278 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 GSK3AP49840 483 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 GMFBP60983 142 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 FAM3AP98173 230 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 KPNB1Q14974 876 aaKnown RBP7.42□□□□□ -1.22
SDF2-207ENST00000588472 OR8B8Q15620 311 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 TMEM155Q4W5P6 130 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 ESCO2Q56NI9 601 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 LIPNQ5VXI9 398 aa7.42□□□□□ -1.22
SDF2-207ENST00000588472 LYPD2Q6UXB3 125 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms