RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 C8orf4Q9NR00 106 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 TMEM106BQ9NUM4 274 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 CLN6Q9NWW5 311 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.55□□□□□ -1.04
TPM4-207ENST00000588032 WIPI2Q9Y4P8 454 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 LRP12Q9Y561 859 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 NPTNQ9Y639 398 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 CACNG2Q9Y698 323 aa8.55□□□□□ -1.04
TPM4-207ENST00000588032 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.54□□□□□ -1.04
TPM4-207ENST00000588032 TMEM269A0A1B0GVZ9 245 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 LRRC30A6NM36 301 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 ANKRD30BLA7E2S9 258 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 INAFM1C9JVW0 142 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 E9PQ18 207 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 M0R129 80 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 MLNRO43193 412 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 CRLF1O75462 422 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 FSTL3O95633 263 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 TGFAP01135 160 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 MRPL3P09001 348 aaKnown RBP8.54□□□□□ -1.04
TPM4-207ENST00000588032 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
TPM4-207ENST00000588032 PCMT1P22061 227 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 CPT2P23786 658 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 ATP6V1E1P36543 226 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 CD200P41217 278 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 MMP16P51512 607 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 RIDAP52758 137 aaKnown RBP8.54□□□□□ -1.04
TPM4-207ENST00000588032 CDH15P55291 814 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 SNRPGP62308 76 aaKnown RBP8.54□□□□□ -1.04
TPM4-207ENST00000588032 FAM3AP98173 230 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 MVKQ03426 396 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 OR8G1Q15617 311 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 OCLNQ16625 522 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 ZNF829Q3KNS6 432 aaPredicted RBP8.54□□□□□ -1.04
TPM4-207ENST00000588032 C1orf87Q8N0U7 546 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 OR10AD1Q8NGE0 317 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 FAM81AQ8TBF8 368 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 RDH12Q96NR8 316 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 GCM1Q9NP62 436 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 BRD7Q9NPI1 651 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 C14orf119Q9NWQ9 140 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 DNAJC27Q9NZQ0 273 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 LPAR3Q9UBY5 353 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 KCNS2Q9ULS6 477 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 KLHDC2Q9Y2U9 406 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 ACANP16112 2415 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 CR1P17927 2039 aa8.54□□□□□ -1.04
TPM4-207ENST00000588032 CHD3Q12873 2000 aaKnown RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 A0A0U1RQV5 110 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 hCG_38984A0A1B0GV85 526 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 C5orf63A6NC05 138 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 F5H5P2 479 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 H0YL77 283 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 TMEM178BH3BS89 294 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 PTBP3O95758 552 aaKnown RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 HLA-DPB1P04440 258 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 IRF2P14316 349 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ATP6V1B1P15313 513 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ZNF16P17020 682 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 CA6P23280 308 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 GSK3AP49840 483 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 DVL1P1P54792 670 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 CXCR4P61073 352 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 LMO4P61968 165 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 MAB21L1Q13394 359 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 OR8B8Q15620 311 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ZIK1Q3SY52 487 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 TMEM155Q4W5P6 130 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 SPRNQ5BIV9 151 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 AVPI1Q5T686 147 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ZNF322Q6U7Q0 402 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 LRRC28Q86X40 367 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 MUC20Q8N307 709 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 KLHL36Q8N4N3 616 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 OR56B2PQ8NGI1 322 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 OR51G2Q8NGK0 314 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 OR11L1Q8NGX0 322 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 Q8TCH9 128 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 POM121Q96HA1 1249 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 Q96MT0 163 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 MYCBPQ99417 103 aaPredicted RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 SLC29A1Q99808 456 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ZNF665Q9H7R5 613 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ABCB9Q9NP78 766 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 FAM206AQ9NX38 181 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 TREM2Q9NZC2 230 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 ZNF319Q9P2F9 582 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 CDC42EP3Q9UKI2 254 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 IKZF2Q9UKS7 526 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 COPS3Q9UNS2 423 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 PCDHGB1Q9Y5G3 927 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 GMPPBQ9Y5P6 360 aa8.53□□□□□ -1.04
TPM4-207ENST00000588032 FLNAP21333 2647 aaKnown RBP8.53□□□□□ -1.04
TPM4-207ENST00000588032 LOC100130705A0A1B0GUX0 176 aa8.52□□□□□ -1.05
TPM4-207ENST00000588032 ISPDA4D126 451 aa8.52□□□□□ -1.05
TPM4-207ENST00000588032 WNT9BO14905 357 aa8.52□□□□□ -1.05
TPM4-207ENST00000588032 SLC16A6O15403 523 aa8.52□□□□□ -1.05
TPM4-207ENST00000588032 SULT1C4O75897 302 aa8.52□□□□□ -1.05
TPM4-207ENST00000588032 IGHV2-70P01814 119 aa8.52□□□□□ -1.05
TPM4-207ENST00000588032 KRT8P05787 483 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms