RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PSMB10P40306 273 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 MTNR1AP48039 350 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 SLC25A1P53007 311 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 MS4A2Q01362 244 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 POU4F2Q12837 409 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 MICAQ29983 383 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 C9orf139Q6ZV77 190 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 OR6K6Q8NGW6 343 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 TECTBQ96PL2 329 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 KCNJ15Q99712 375 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 NMNAT2Q9BZQ4 307 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 SLC22A4Q9H015 551 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 RASSF4Q9H2L5 321 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 MED20Q9H944 212 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 C1orf123Q9NWV4 160 aa11.93□□□□□ -0.5
VMP1-206ENST00000587945 MRPL15Q9P015 296 aaKnown RBP11.93□□□□□ -0.5
VMP1-206ENST00000587945 NOP16Q9Y3C1 178 aaKnown RBP11.93□□□□□ -0.5
VMP1-206ENST00000587945 SAMHD1Q9Y3Z3 626 aaKnown RBP11.93□□□□□ -0.5
VMP1-206ENST00000587945 DHRS12A0PJE2 317 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 A6NLC8 198 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 LGALS8O00214 317 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 GMDSO60547 372 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
VMP1-206ENST00000587945 OR8B8Q15620 311 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 PCK2Q16822 640 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 DEFB112Q30KQ8 113 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 OR2T5Q6IEZ7 315 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 DHFR2Q86XF0 187 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 IQCF1Q8N6M8 205 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 OR2T33Q8NG76 320 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 OR2T29Q8NH02 315 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 SLC25A28Q96A46 364 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 NSL1Q96IY1 281 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 DGCR6LQ9BY27 220 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 MAGIXQ9H6Y5 334 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 REEP1Q9H902 201 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 UNKLQ9H9P5 680 aaKnown RBP11.92□□□□□ -0.5
VMP1-206ENST00000587945 ZMAT3Q9HA38 289 aaKnown RBP11.92□□□□□ -0.5
VMP1-206ENST00000587945 SMURF1Q9HCE7 757 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 TNFRSF19Q9NS68 423 aa11.92□□□□□ -0.5
VMP1-206ENST00000587945 IGHV3OR15-7A0A075B7D8 119 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 FAM183AA6NL82 134 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 ZNF878C9JN71 531 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 CLDN34H7C241 214 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 TNFRSF13BO14836 293 aaPredicted RBP11.91□□□□□ -0.5
VMP1-206ENST00000587945 TMPRSS2O15393 492 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
VMP1-206ENST00000587945 TBX1O43435 398 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 ADAM20O43506 726 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 ENSAO43768 121 aaKnown RBP11.91□□□□□ -0.5
VMP1-206ENST00000587945 IFNGP01579 166 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 GYPAP02724 150 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 SFTPBP07988 381 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 MNAT1P51948 309 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 EIF2B1Q14232 305 aaKnown RBP11.91□□□□□ -0.5
VMP1-206ENST00000587945 TEX30Q5JUR7 227 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 LINC01590Q5TEZ4 76 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 RUSC1-AS1Q66K80 236 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 LCN8Q6JVE9 175 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 OTULINQ96BN8 352 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 NIPSNAP1Q9BPW8 284 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 PCGF1Q9BSM1 259 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 PPP1R3EQ9H7J1 279 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 ERVK-18Q9QC07 812 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 BAIAP2Q9UQB8 552 aa11.91□□□□□ -0.5
VMP1-206ENST00000587945 TRRAPQ9Y4A5 3859 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 TRAV38-1A0A0B4J264 116 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 hCG_1807616A0A1W2PRN6 198 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 OOEPA6NGQ2 149 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 RIIAD1A6NNX1 92 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 FCN3O75636 299 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 ANXA2P07355 339 aaKnown RBP11.9□□□□□ -0.5
VMP1-206ENST00000587945 ZNF3P17036 446 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 OMGP23515 440 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 CFHR2P36980 270 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 CX3CR1P49238 355 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 ELF3P78545 371 aaPredicted RBP11.9□□□□□ -0.5
VMP1-206ENST00000587945 TRIM25Q14258 630 aaKnown RBP11.9□□□□□ -0.5
VMP1-206ENST00000587945 KCNJ8Q15842 424 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 FAM98BQ52LJ0 330 aaKnown RBP11.9□□□□□ -0.5
VMP1-206ENST00000587945 SHISA2Q6UWI4 295 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 FAM57BQ71RH2 274 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 SLC16A9Q7RTY1 509 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 DPY19L4Q7Z388 723 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 WDR86Q86TI4 376 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
VMP1-206ENST00000587945 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 SPERTQ8NA61 448 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 PLPP7Q8NBV4 271 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 OR10G2Q8NGC3 310 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 OR6N2Q8NGY6 317 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 SPSB4Q96A44 273 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 SGK3Q96BR1 496 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 CCT8L2Q96SF2 557 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 AMELYQ99218 206 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 ABHD6Q9BV23 337 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 CMC2Q9NRP2 79 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 DNAJC27Q9NZQ0 273 aa11.9□□□□□ -0.5
VMP1-206ENST00000587945 MGAM2Q2M2H8 2515 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms