RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CD8AP01732 235 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 HTR1AP08908 422 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 NAT2P11245 290 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 PTH2RP49190 550 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MMP16P51512 607 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 PSG7Q13046 419 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MRPL28Q13084 256 aaKnown RBP11.87□□□□□ -0.51
TRAF4-215ENST00000584944 C6orf141Q5SZD1 244 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 LIPNQ5VXI9 398 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 OR2T2Q6IF00 324 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 SSX6Q7RTT6 188 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 KLHL36Q8N4N3 616 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 C4orf36Q96KX1 117 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 DIRC2Q96SL1 478 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 PBOV1Q9GZY1 135 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 TPK1Q9H3S4 243 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MRPS18AQ9NVS2 196 aaKnown RBP11.87□□□□□ -0.51
TRAF4-215ENST00000584944 ERVK13-1Q9NX77 482 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 NKIRAS2Q9NYR9 191 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 MRM2Q9UI43 246 aaKnown RBP11.87□□□□□ -0.51
TRAF4-215ENST00000584944 OR52A1Q9UKL2 312 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 ZDHHC8Q9ULC8 765 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 DIMT1Q9UNQ2 313 aaKnown RBP11.87□□□□□ -0.51
TRAF4-215ENST00000584944 ERGIC3Q9Y282 383 aa11.87□□□□□ -0.51
TRAF4-215ENST00000584944 IGLV3-9A0A075B6K5 115 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-215ENST00000584944 SPRY3O43610 288 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 IGHA1P01876 353 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 PIPP12273 146 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-215ENST00000584944 KITLGP21583 273 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 DDOSTP39656 456 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 EFNA4P52798 201 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF85Q03923 595 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF92Q03936 586 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 MST1LQ2TV78 715 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 SYS1Q8N2H4 156 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 OR2Z1Q8NG97 314 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 OR8B12Q8NGG6 310 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 OR13G1Q8NGZ3 307 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 NEU4Q8WWR8 484 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-215ENST00000584944 CCDC90BQ9GZT6 254 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 SLC22A4Q9H015 551 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 POFUT1Q9H488 388 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 PLEKHA1Q9HB21 404 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 FGF20Q9NP95 211 aaPredicted RBP11.86□□□□□ -0.51
TRAF4-215ENST00000584944 PLCXD1Q9NUJ7 323 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 ACOXLQ9NUZ1 547 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 TMEM100Q9NV29 134 aa11.86□□□□□ -0.51
TRAF4-215ENST00000584944 MYEF2Q9P2K5 600 aaKnown RBP11.86□□□□□ -0.51
TRAF4-215ENST00000584944 NUFIP1Q9UHK0 495 aaKnown RBP11.86□□□□□ -0.51
TRAF4-215ENST00000584944 A0A1B0GVI7 797 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 CD300LBA8K4G0 201 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 SLC1A7O00341 560 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 SSX4O60224 188 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 RPSAP08865 295 aaKnown RBP11.85□□□□□ -0.51
TRAF4-215ENST00000584944 PSMB10P40306 273 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 MAP2K3P46734 347 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 OR12D2P58182 307 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 MFGE8Q08431 387 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-215ENST00000584944 MZT1Q08AG7 82 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 TSTQ16762 297 aaKnown RBP11.85□□□□□ -0.51
TRAF4-215ENST00000584944 ODF4Q2M2E3 257 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 CDONQ4KMG0 1287 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 C11orf71Q6IPW1 123 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 CLEC2AQ6UVW9 174 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 EGFL6Q8IUX8 553 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 CSNK2A3Q8NEV1 391 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 WFDC11Q8NEX6 87 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 OR8G5Q8NG78 346 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 OR51E1Q8TCB6 317 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 FBLIM1Q8WUP2 373 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 GGHQ92820 318 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 FAM71F1Q96KD3 344 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-215ENST00000584944 HIST1H2AAQ96QV6 131 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 SIGLEC11Q96RL6 698 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 GSX2Q9BZM3 304 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 COMMD4Q9H0A8 199 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 MSL2Q9HCI7 577 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 FAM206AQ9NX38 181 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 PSORS1C1Q9UIG5 152 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 CAB39Q9Y376 341 aaPredicted RBP11.85□□□□□ -0.51
TRAF4-215ENST00000584944 PLCE1Q9P212 2302 aa11.85□□□□□ -0.51
TRAF4-215ENST00000584944 A0A0U1RQV5 110 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 TMEM129A0AVI4 362 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 C17orf100A8MU93 164 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 PRR32B1ATL7 298 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 J3QRE1 110 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 OVOL3O00110 214 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 RGS10O43665 173 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 CCDC159P0C7I6 412 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 OCM2P0CE71 109 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 OCMP0CE72 109 aaPredicted RBP11.84□□□□□ -0.51
TRAF4-215ENST00000584944 UBCP0CG48 685 aaKnown RBP11.84□□□□□ -0.51
TRAF4-215ENST00000584944 ZNF12P17014 697 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 GSK3AP49840 483 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 ETV1P50549 477 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 PRSS12P56730 875 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 CCL8P80075 99 aa11.84□□□□□ -0.51
TRAF4-215ENST00000584944 TNFAIP6P98066 277 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms