RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SLX4IP	Q5VYV7	408 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	MOGAT3	Q86VF5	341 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	LRRC28	Q86X40	367 aa	Predicted RBP	11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZDHHC13	Q8IUH4	622 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	SPIC	Q8N5J4	248 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	CELF2-AS1	Q8N7Q2	184 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF454	Q8N9F8	522 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	OR56B2P	Q8NGI1	322 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	ADAT1	Q9BUB4	502 aa	Known RBP	11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	TVP23B	Q9NYZ1	205 aa		11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	MRPL15	Q9P015	296 aa	Known RBP	11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	NOP16	Q9Y3C1	178 aa	Known RBP	11.18	□□□□□ -0.62
SREBF1-223	ENST00000584760	hCG_38984	A0A1B0GV85	526 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	GGT3P	A6NGU5	568 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZAR1L	A6NP61	321 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760		F5H0A9	414 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760		M0R129	80 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	PRKY	O43930	277 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	VENTX	O95231	258 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	PTBP3	O95758	552 aa	Known RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	CYB5R3	P00387	301 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	APOC1	P02654	83 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	ANXA2	P07355	339 aa	Known RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	H2BFM	P0C1H6	154 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	EGR1	P18146	543 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	CA6	P23280	308 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	MDH2	P40926	338 aa	Known RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	PMEL	P40967	661 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	PSMA6	P60900	246 aa	Known RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	RPS7	P62081	194 aa	Known RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	OR8G1	Q15617	311 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	C12orf73	Q69YU5	71 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	SLC16A9	Q7RTY1	509 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	KLHL36	Q8N4N3	616 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	OR52H1	Q8NGJ2	320 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760		Q8TCH9	128 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	DVL3	Q92997	716 aa	Predicted RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	CIB1	Q99828	191 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	PRRG3	Q9BZD7	231 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	SLC22A4	Q9H015	551 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	PATZ1	Q9HBE1	687 aa	Known RBP	11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	DNAJC27	Q9NZQ0	273 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF319	Q9P2F9	582 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	METRN	Q9UJH8	293 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	OAZ3	Q9UMX2	235 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760	N6AMT1	Q9Y5N5	214 aa		11.17	□□□□□ -0.62
SREBF1-223	ENST00000584760		A0A0G2JMP0	313 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760		A0A0X1KG70	313 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	CEACAM18	A8MTB9	384 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760		A8MXK9	166 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	TBX1	O43435	398 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	GMDS	O60547	372 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	FSTL3	O95633	263 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	ALOX5AP	P20292	161 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	ACTR3	P61158	418 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	SEC61A1	P61619	476 aa	Known RBP	11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	LCN2	P80188	198 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	EFNB1	P98172	346 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	FAM3A	P98173	230 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	MPPED2	Q15777	294 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	TIGD6	Q17RP2	521 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	PRAMEF6	Q5VXH4	476 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	LRRN1	Q6UXK5	716 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	CCDC121	Q6ZUS5	278 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	FAM57B	Q71RH2	274 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	MUC20	Q8N307	709 aa	Predicted RBP	11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	OR4M2	Q8NGB6	313 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	THEM6	Q8WUY1	208 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	PYDC1	Q8WXC3	89 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	ERGIC1	Q969X5	290 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	SGK3	Q96BR1	496 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	CENPN	Q96H22	339 aa	Predicted RBP	11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	REEP6	Q96HR9	211 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	TEAD3	Q99594	435 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	TMPRSS13	Q9BYE2	586 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	YIPF3	Q9GZM5	350 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	SEMA6A	Q9H2E6	1030 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	LRP12	Q9Y561	859 aa		11.16	□□□□□ -0.62
SREBF1-223	ENST00000584760	PPIAL4E	A0A075B759	164 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	PPIAL4C	A0A0B4J2A2	164 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	LRRC30	A6NM36	301 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	PRR32	B1ATL7	298 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	PPIAL4D	F5H284	164 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760		H3BNX3	289 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760		J3QLI3	93 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	FAM20B	O75063	409 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	FOXH1	O75593	365 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF205	O95201	554 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	AVP	P01185	164 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	MRPL3	P09001	348 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	PPIAL4F	P0DN26	164 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	GATA3	P23771	443 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZFP36	P26651	326 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	DDOST	P39656	456 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	HCCS	P53701	268 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	ZNF404	Q494X3	552 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	LCN1P1	Q5VSP4	162 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	AADACL4	Q5VUY2	407 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	FAHD2B	Q6P2I3	314 aa	Predicted RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms