RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	OR56B2P	Q8NGI1	322 aa		12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	GNPDA2	Q8TDQ7	276 aa		12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	ZNRF4	Q8WWF5	429 aa		12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	ST8SIA4	Q92187	359 aa		12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	MCUR1	Q96AQ8	359 aa		12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	COPS4	Q9BT78	406 aa		12.54	□□□□□ -0.4
SREBF1-222	ENST00000583732	TRAV38-1	A0A0B4J264	116 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732		A0A0U1RQK1	487 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	CLPSL1	A2RUU4	121 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	TNFRSF13B	O14836	293 aa	Predicted RBP	12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	GMDS	O60547	372 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	FCN3	O75636	299 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	IGHV4-59	P01825	116 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	FABP3	P05413	133 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	SPARC	P09486	303 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	IFNGR2	P38484	337 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	GSS	P48637	474 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	BPIFB3	P59826	476 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	ELF3	P78545	371 aa	Predicted RBP	12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	TSPAN31	Q12999	210 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	TAF13	Q15543	124 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	PGBD2	Q6P3X8	592 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	BTN2A1	Q7KYR7	527 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	DCXR	Q7Z4W1	244 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	GCSAM	Q8N6F7	178 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	PNLDC1	Q8NA58	520 aa	Known RBP	12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	OR9Q2	Q8NGE9	314 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	OR52L1	Q8NGH7	329 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	OR9Q1	Q8NGQ5	310 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	CMTM5	Q96DZ9	223 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	SIRPD	Q9H106	197 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	CENPM	Q9NSP4	180 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	ACOXL	Q9NUZ1	547 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	ZNF446	Q9NWS9	450 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	KCNG2	Q9UJ96	466 aa		12.53	□□□□□ -0.4
SREBF1-222	ENST00000583732	IGHV1-69D	A0A0B4J2H0	117 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732		A0A1B0GW55	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DVL1	O14640	695 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	TBX1	O43435	398 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	IDH3B	O43837	385 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	GPR137B	O60478	399 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	NDUFA7	O95182	113 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	IGHV1-69	P01742	117 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L2	P0CJ85	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L3	P0CJ86	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L4	P0CJ87	422 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L5	P0CJ88	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L6	P0CJ89	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L7	P0CJ90	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	KRTAP10-3	P60369	221 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	PDCD1	Q15116	288 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4L9	Q6RFH8	374 aa	Predicted RBP	12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DRAM2	Q6UX65	266 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	FAM90A1	Q86YD7	464 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	ZDHHC21	Q8IVQ6	265 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	TMEM86B	Q8N661	226 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	SLC37A3	Q8NCC5	494 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	TBC1D15	Q8TC07	691 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	SSMEM1	Q8WWF3	244 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	SLAMF6	Q96DU3	332 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	NSMCE2	Q96MF7	247 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	ELAC2	Q9BQ52	826 aa	Known RBP	12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	TRIM15	Q9C019	465 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	MYLK2	Q9H1R3	596 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	GORASP2	Q9H8Y8	452 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	TRIM36	Q9NQ86	728 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	MRPL15	Q9P015	296 aa	Known RBP	12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	DUX4	Q9UBX2	424 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	MAGEL2	Q9UJ55	1249 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	CDH10	Q9Y6N8	788 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732	COMMD3-BMI1	R4GMX3	469 aa		12.52	□□□□□ -0.41
SREBF1-222	ENST00000583732		M0QZ24	198 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	BHLHE40	O14503	412 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	ARPC2	O15144	300 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	PTBP3	O95758	552 aa	Known RBP	12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	GYPB	P06028	91 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	LIPF	P07098	398 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	OTX1	P32242	354 aa	Predicted RBP	12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	PRB3	Q04118	309 aa	Predicted RBP	12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	ZNF511	Q8NB15	262 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR4C15	Q8NGM1	316 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR8D4	Q8NGM9	314 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR2T4	Q8NH00	348 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	OR8S1	Q8NH09	359 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	LRRC29	Q8WV35	223 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	CITED1	Q99966	193 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	FAM107B	Q9H098	131 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	SEMA6A	Q9H2E6	1030 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	TBC1D23	Q9NUY8	699 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	ONECUT1	Q9UBC0	465 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	DNAJB11	Q9UBS4	358 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	RNF114	Q9Y508	228 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	POMT1	Q9Y6A1	747 aa		12.51	□□□□□ -0.41
SREBF1-222	ENST00000583732	NDUFA2	O43678	99 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	ANXA2	P07355	339 aa	Known RBP	12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	PRDX6	P30041	224 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	ENTPD1	P49961	510 aa		12.5	□□□□□ -0.41
SREBF1-222	ENST00000583732	CSNK2B	P67870	215 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms