RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ACOT11Q8WXI4 607 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PHYHIPQ92561 330 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 RASL10AQ92737 203 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 RFT1Q96AA3 541 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 RAD51AP1Q96B01 352 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MED8Q96G25 268 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR2A7Q96R45 310 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 UTP23Q9BRU9 249 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 FAIM2Q9BWQ8 316 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 WWTR1Q9GZV5 400 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SHARPINQ9H0F6 387 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PCBD2Q9H0N5 130 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ABCG5Q9H222 651 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ARRDC1-AS1Q9H2J1 176 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR51J1Q9H342 316 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 OR51I1Q9H343 314 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 NARFLQ9H6Q4 476 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MTHFD2LQ9H903 347 aaPredicted RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PLEKHA1Q9HB21 404 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 DNAJC4Q9NNZ3 241 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 LHX9Q9NQ69 397 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MIEF1Q9NQG6 463 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MRPL17Q9NRX2 175 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 LYARQ9NX58 379 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 NLGN3Q9NZ94 848 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 MAT2BQ9NZL9 334 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 CALML5Q9NZT1 146 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 P2RX2Q9UBL9 471 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SEC14L3Q9UDX4 400 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 IL20RAQ9UHF4 553 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 KIF25Q9UIL4 384 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 SCP2D1Q9UJQ7 156 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 FBXL3Q9UKT7 428 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 RARRES3Q9UL19 164 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PRELID1Q9Y255 219 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 YARS2Q9Y2Z4 477 aaKnown RBP3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 ANAPC1Q9H1A4 1944 aa3.29□□□□□ -1.88
SMCHD1-208ENST00000583344 PLXNA2O75051 1894 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 A0A1W2PPR1 153 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 GSAPA4D1B5 854 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR2AG2A6NM03 316 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 GPR171O14626 319 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 LRRTM2O43300 516 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 LANCL1O43813 399 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR10H2O60403 315 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SH3BGRLO75368 114 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MTX2O75431 263 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 UBL3O95164 117 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR5F1O95221 314 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MPC2O95563 127 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 TGM6O95932 706 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 PAHP00439 452 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SERPINA3P01011 423 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 IL5P05113 134 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 PCCBP05166 539 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF250P15622 560 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 CA6P23280 308 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 PPP2R1BP30154 601 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MNDAP41218 407 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 TSFMP43897 325 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 CDX1P47902 265 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 PAX9P55771 341 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 TAS2R43P59537 309 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 RAB14P61106 215 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SNTB2Q13425 540 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZIC1Q15915 447 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MAPK14Q16539 360 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF311Q5JNZ3 666 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 NHLRC3Q5JS37 347 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ELFN2Q5R3F8 820 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 DMKNQ6E0U4 476 aaPredicted RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR4C11Q6IEV9 310 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SMARCD3Q6STE5 483 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 BTNL8Q6UX41 500 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 Q6ZR54 194 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 RTL4Q6ZR62 310 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 DNM1P46Q6ZS02 220 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MBOAT2Q6ZWT7 520 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ADGRD2Q7Z7M1 963 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 LUZP2Q86TE4 346 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 COMTD1Q86VU5 262 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF573Q86YE8 665 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 GID4Q8IVV7 300 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR6V1Q8N148 313 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC43A2Q8N370 569 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 EID2Q8N6I1 236 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SYT14Q8NB59 555 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 Q8NBF4 154 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 ZNF740Q8NDX6 193 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR56B1Q8NGI3 324 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR6T1Q8NGN1 323 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR4Q3Q8NH05 313 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 OR5W2Q8NH69 310 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 LRRC20Q8TCA0 184 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 MRPS31Q92665 395 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 RAB8BQ92930 207 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 RBPMSQ93062 196 aaKnown RBP3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 YIPF5Q969M3 257 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 NXPE2Q96DL1 559 aa3.28□□□□□ -1.88
SMCHD1-208ENST00000583344 SLC35G5Q96KT7 338 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms