RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, human

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SS18-222	ENST00000582792	TEX13C	A0A0J9YWL9	993 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	OR6C6	A6NF89	314 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	LRRC30	A6NM36	301 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792		H0YL77	283 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	PPP1R3D	O95685	299 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	GRK5	P34947	590 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	RGS6	P49758	472 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	KRTAP10-3	P60369	221 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	AQP6	Q13520	282 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	HLX	Q14774	488 aa	Predicted RBP	11.29	□□□□□ -0.6
SS18-222	ENST00000582792	MEST	Q5EB52	335 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	OR2T2	Q6IF00	324 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	MOGAT3	Q86VF5	341 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	C1orf87	Q8N0U7	546 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	OR8D4	Q8NGM9	314 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	TEX47	Q8TBZ9	253 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	RASD2	Q96D21	266 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.29	□□□□□ -0.6
SS18-222	ENST00000582792	ZNF582	Q96NG8	517 aa	Predicted RBP	11.29	□□□□□ -0.6
SS18-222	ENST00000582792	CDADC1	Q9BWV3	514 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	SLC25A19	Q9HC21	320 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.29	□□□□□ -0.6
SS18-222	ENST00000582792	TBC1D23	Q9NUY8	699 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	USE1	Q9NZ43	259 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	ATPIF1	Q9UII2	106 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	OAZ3	Q9UMX2	235 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	POMT1	Q9Y6A1	747 aa		11.29	□□□□□ -0.6
SS18-222	ENST00000582792	IGHV3-64D	A0A0J9YX35	117 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	ANKRD65	E5RJM6	399 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	PHYH	O14832	338 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	MLNR	O43193	412 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	HMGN1	P05114	100 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	MELTF	P08582	738 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	NOS3	P29474	1203 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	CRABP1	P29762	137 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	RPL15	P61313	204 aa	Known RBP	11.28	□□□□□ -0.6
SS18-222	ENST00000582792	ELF3	P78545	371 aa	Predicted RBP	11.28	□□□□□ -0.6
SS18-222	ENST00000582792	CDK5	Q00535	292 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	PDCD1	Q15116	288 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	SLC36A3	Q495N2	470 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	CCDC92	Q53HC0	331 aa	Predicted RBP	11.28	□□□□□ -0.6
SS18-222	ENST00000582792	FAM201A	Q5SY85	155 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	WDR25	Q64LD2	544 aa	Predicted RBP	11.28	□□□□□ -0.6
SS18-222	ENST00000582792	RUSC1-AS1	Q66K80	236 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	ASPHD2	Q6ICH7	369 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	LYPD2	Q6UXB3	125 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	ZNF841	Q6ZN19	808 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	DCDC5	Q6ZRR9	648 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	OR5L1	Q8NGL2	311 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	OR1F12	Q8NHA8	337 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	DDO	Q99489	341 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	SLC30A2	Q9BRI3	323 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	C9orf16	Q9BUW7	83 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	TEX12	Q9BXU0	123 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	KRT84	Q9NSB2	600 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792	ASH2L	Q9UBL3	628 aa		11.28	□□□□□ -0.6
SS18-222	ENST00000582792		A0A1B0GWJ7	208 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	IQCF6	A8MYZ5	107 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	C22orf46	C9J442	243 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792		F5H5P2	479 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792		H3BN98	237 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	TNFRSF13B	O14836	293 aa	Predicted RBP	11.27	□□□□□ -0.61
SS18-222	ENST00000582792	ENSA	O43768	121 aa	Known RBP	11.27	□□□□□ -0.61
SS18-222	ENST00000582792	SOX14	O95416	240 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	REN	P00797	406 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	IFNG	P01579	166 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	DBH	P09172	617 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	HIST1H1C	P16403	213 aa	Known RBP	11.27	□□□□□ -0.61
SS18-222	ENST00000582792	CTLA4	P16410	223 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	SELE	P16581	610 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	PMEL	P40967	661 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	CDKN2A	P42771	156 aa	Known RBP	11.27	□□□□□ -0.61
SS18-222	ENST00000582792	CRISP1	P54107	249 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	LSM6	P62312	80 aa	Known RBP	11.27	□□□□□ -0.61
SS18-222	ENST00000582792	CLEC12A	Q5QGZ9	265 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	OTP	Q5XKR4	325 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	DNM1P34	Q6PK57	102 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	PTCHD4	Q6ZW05	846 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	OR4Q3	Q8NH05	313 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	UBE2F	Q969M7	185 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	APOBEC3D	Q96AK3	386 aa	Predicted RBP	11.27	□□□□□ -0.61
SS18-222	ENST00000582792	PCGF1	Q9BSM1	259 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	DCLRE1B	Q9H816	532 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	C8orf4	Q9NR00	106 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	CMC2	Q9NRP2	79 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	RNF114	Q9Y508	228 aa		11.27	□□□□□ -0.61
SS18-222	ENST00000582792	SAC3D1	A6NKF1	404 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	P2RY10	O00398	339 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	SOCS2	O14508	198 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	RER1	O15258	196 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	KHDRBS3	O75525	346 aa	Known RBP	11.26	□□□□□ -0.61
SS18-222	ENST00000582792	CLPX	O76031	633 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	BAG2	O95816	211 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	ALPL	P05186	524 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	CFHR2	P36980	270 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	PSMB10	P40306	273 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	GATA4	P43694	442 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	ALDH3A2	P51648	485 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	SLC25A1	P53007	311 aa		11.26	□□□□□ -0.61
SS18-222	ENST00000582792	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.26	□□□□□ -0.61

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