RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	RELB	Q01201	579 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PRB3	Q04118	309 aa	Predicted RBP	9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PPP1R8	Q12972	351 aa	Known RBP	9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	TAF13	Q15543	124 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	KCNJ8	Q15842	424 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	MIDN	Q504T8	468 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114		Q6YL49	198 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ZNF511	Q8NB15	262 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SLC37A3	Q8NCC5	494 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OR8D4	Q8NGM9	314 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	LHX4	Q969G2	390 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	WDFY2	Q96P53	400 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CDRT15	Q96T59	188 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	BTBD10	Q9BSF8	475 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SLC22A4	Q9H015	551 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SLITRK2	Q9H156	845 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	TBC1D23	Q9NUY8	699 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	C1RL	Q9NZP8	487 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PDP1	Q9P0J1	537 aa	Predicted RBP	9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	KIF17	Q9P2E2	1029 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	KCNG2	Q9UJ96	466 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CDH10	Q9Y6N8	788 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	COMMD3-BMI1	R4GMX3	469 aa		9.64	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	TRAV38-1	A0A0B4J264	116 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CENPVL3	A0A0U1RRI6	287 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114		A0A1B0GW55	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	TNFRSF11B	O00300	401 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	P2RY10	O00398	339 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	GMDS	O60547	372 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	MELTF	P08582	738 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L2	P0CJ85	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L3	P0CJ86	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L4	P0CJ87	422 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L5	P0CJ88	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L6	P0CJ89	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L7	P0CJ90	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CLU	P10909	449 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	HSD17B1	P14061	328 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	NPY4R	P50391	375 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ARF6	P62330	175 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CRMP1	Q14194	572 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SAMD4B	Q5PRF9	694 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	METTL11B	Q5VVY1	283 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CD276	Q5ZPR3	534 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4L9	Q6RFH8	374 aa	Predicted RBP	9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DRAM2	Q6UX65	266 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CYP2R1	Q6VVX0	501 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	C17orf107	Q6ZR85	190 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	BTN2A1	Q7KYR7	527 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	FAM90A1	Q86YD7	464 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	GCSAM	Q8N6F7	178 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OR6K6	Q8NGW6	343 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OR2T4	Q8NH00	348 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	WFDC12	Q8WWY7	111 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	GATAD2B	Q8WXI9	593 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ST8SIA4	Q92187	359 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SLAMF6	Q96DU3	332 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DDO	Q99489	341 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PPP1R3E	Q9H7J1	279 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	BEX1	Q9HBH7	125 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	IL1RAP	Q9NPH3	570 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	MED4	Q9NPJ6	270 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	MRPL15	Q9P015	296 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DNAJB11	Q9UBS4	358 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DUX4	Q9UBX2	424 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CD300A	Q9UGN4	299 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	NOP16	Q9Y3C1	178 aa	Known RBP	9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	LYVE1	Q9Y5Y7	322 aa		9.63	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ZNF593	O00488	134 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	DVL1	O14640	695 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	TNFRSF13B	O14836	293 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SOX14	O95416	240 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	GAST	P01350	101 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	IGHV4-59	P01825	116 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ANXA2	P07355	339 aa	Known RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OTX1	P32242	354 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ENTPD1	P49961	510 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	GMFB	P60983	142 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CSNK2B	P67870	215 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	GFOD2	Q3B7J2	385 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PDLIM3	Q53GG5	364 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ZNF362	Q5T0B9	420 aa	Predicted RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OLFML2A	Q68BL7	652 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	BRICD5	Q6PL45	260 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PGAM4	Q8N0Y7	254 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PNLDC1	Q8NA58	520 aa	Known RBP	9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SCCPDH	Q8NBX0	429 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OR4Q3	Q8NH05	313 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OR8S1	Q8NH09	359 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	OR4F5	Q8NH21	305 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	LRRC29	Q8WV35	223 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	SEH1L	Q96EE3	360 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	CCT8L2	Q96SF2	557 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	TSSK6	Q9BXA6	273 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	PRDM13	Q9H4Q3	707 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	NOX4	Q9NPH5	578 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ACOXL	Q9NUZ1	547 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ARL8B	Q9NVJ2	186 aa		9.62	□□□□□ -0.87
CDK5RAP3-223	ENST00000582114	ARMC1	Q9NVT9	282 aa		9.62	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms