RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MRPS10P82664 201 aaKnown RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 TGFBR3Q03167 851 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 C2orf76Q3KRA6 126 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 NRN1LQ496H8 165 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 PRR30Q53SZ7 412 aaPredicted RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 RNASE12Q5GAN4 147 aaKnown RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 GLYATL3Q5SZD4 288 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 HIST2H3PS2Q5TEC6 136 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 C9orf135Q5VTT2 229 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 RSBN1Q5VWQ0 802 aaPredicted RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 ZNF774Q6NX45 483 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 PLET1Q6UQ28 207 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 CCBE1Q6UXH8 406 aaPredicted RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 HIST2H3AQ71DI3 136 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 PLPP7Q8NBV4 271 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 OR51D1Q8NGF3 324 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 OR1J2Q8NGS2 313 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 AKR7LQ8NHP1 331 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 SSC4DQ8WTU2 575 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 AKAP1Q92667 903 aaKnown RBP eCLIP8.14□□□□□ -1.11
SS18-220ENST00000582092 GMPPAQ96IJ6 420 aaPredicted RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 SDHCQ99643 169 aaPredicted RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 SOSTQ9BQB4 213 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 OR2H1Q9GZK4 316 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 ATG5Q9H1Y0 275 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 ABCG5Q9H222 651 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 C12orf49Q9H741 205 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 SLC17A5Q9NRA2 495 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 SLC7A10Q9NS82 523 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 RHBDL2Q9NX52 303 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 SPRR3Q9UBC9 169 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 OR5V1Q9UGF6 321 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 ZNF391Q9UJN7 358 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 CSAG2Q9Y5P2 127 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 LIPGQ9Y5X9 500 aa8.14□□□□□ -1.11
SS18-220ENST00000582092 SMG1Q96Q15 3661 aaKnown RBP8.14□□□□□ -1.11
SS18-220ENST00000582092 KIAA1549Q9HCM3 1950 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 A0A1B0GUH1 482 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 FUOMA2VDF0 154 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 RPL36A-HNRNPH2H7BZ11 118 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 LYRM1O43325 122 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 SCGNO76038 276 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 TPPPO94811 219 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 IGHG3P01860 377 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 IGFBP3P17936 291 aaPredicted RBP8.13□□□□□ -1.11
SS18-220ENST00000582092 ADRA2CP18825 462 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 CCNOP22674 350 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 HOXC12P31275 282 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 THBS4P35443 961 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 DDOSTP39656 456 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 UQCRFS1P47985 274 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 MMP15P51511 669 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 MALLQ13021 153 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 EIF2S3LQ2VIR3 472 aaKnown RBP8.13□□□□□ -1.11
SS18-220ENST00000582092 RNFT1Q5M7Z0 435 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 OR2A2Q6IF42 318 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 GDPD3Q7L5L3 318 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 ZNF627Q7L945 461 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 ZNF554Q86TJ5 538 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 SKA3Q8IX90 412 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 IZUMO1Q8IYV9 350 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 OR13C9Q8NGT0 318 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 PP6455Q8WZ26 134 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 C10orf35Q96D05 121 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 ZNF837Q96EG3 531 aaPredicted RBP8.13□□□□□ -1.11
SS18-220ENST00000582092 UQCC2Q9BRT2 126 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 PNRC2Q9NPJ4 139 aaKnown RBP8.13□□□□□ -1.11
SS18-220ENST00000582092 RAB22AQ9UL26 194 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 POLEQ07864 2286 aa8.13□□□□□ -1.11
SS18-220ENST00000582092 MED12Q93074 2177 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 SPTBN1Q01082 2364 aaKnown RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 PHF3Q92576 2039 aaKnown RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 A0A096LPE4 126 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 A0A1W2PPZ6 126 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CIB4A0PJX0 185 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CLEC18AA5D8T8 446 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 AHRRA9YTQ3 701 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CTDSPLO15194 276 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 XRCC3O43542 346 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 SYNGR3O43761 229 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 RBBP9O75884 186 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 DHRS3O75911 302 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ABOP16442 354 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CDK2P24941 298 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 MPGP29372 298 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 NTF4P34130 210 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 APLNRP35414 380 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 FAUP35544 74 aaKnown RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 ZNF93P35789 620 aaPredicted RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 UBE2NP61088 152 aaKnown RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 PSG4Q00888 419 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 RIPPLY1Q0D2K3 151 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 MRPL49Q13405 166 aaKnown RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 KRTCAP3Q53RY4 240 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 PABPC1L2AQ5JQF8 200 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 FBXW9Q5XUX1 488 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 AWAT2Q6E213 333 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ZNF585AQ6P3V2 769 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ANKRD16Q6P6B7 361 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CLEC18BQ6UXF7 455 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms