RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 GDPD4Q6W3E5 623 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 PEX26Q7Z412 305 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 SH2D6Q7Z4S9 175 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 TMEM25Q86YD3 366 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 WDR31Q8NA23 367 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 MRGPRDQ8TDS7 321 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 DNAJB3Q8WWF6 145 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 FRAT1Q92837 279 aaPredicted RBP2.5□□□□□ -2.01
KPNB1-208ENST00000580019 PSMG2Q969U7 264 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 OTUB2Q96DC9 234 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 CMTM5Q96DZ9 223 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 PGLYRP4Q96LB8 373 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 PSMB7Q99436 277 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 LGMNQ99538 433 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 RBBP8Q99708 897 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 RARRES2Q99969 163 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 APOL2Q9BQE5 337 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 AGMATQ9BSE5 352 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 C1QTNF4Q9BXJ3 329 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 UPF3AQ9H1J1 476 aaKnown RBP2.5□□□□□ -2.01
KPNB1-208ENST00000580019 CENPHQ9H3R5 247 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 DDX31Q9H8H2 851 aaKnown RBP2.5□□□□□ -2.01
KPNB1-208ENST00000580019 TRIM45Q9H8W5 580 aaPredicted RBP2.5□□□□□ -2.01
KPNB1-208ENST00000580019 TIGARQ9NQ88 270 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 SPHK2Q9NRA0 654 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 ABCB10Q9NRK6 738 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 SPATA2Q9UM82 520 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 ACOT9Q9Y305 439 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 POLR3HQ9Y535 204 aaPredicted RBP2.5□□□□□ -2.01
KPNB1-208ENST00000580019 KDM3BQ7LBC6 1761 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 MYO15AQ9UKN7 3530 aa2.5□□□□□ -2.01
KPNB1-208ENST00000580019 SETXQ7Z333 2677 aaKnown RBP2.5□□□□□ -2.01
KPNB1-208ENST00000580019 NCOR2Q9Y618 2525 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 KIF24Q5T7B8 1368 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 KTN1Q86UP2 1357 aaKnown RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ZNF646O15015 1829 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ABCB11O95342 1321 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 MAST4O15021 2626 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 FLNBO75369 2602 aaKnown RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 IGLV3-22A0A075B6J6 115 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ZNF816-ZNF321PA0A0X1KG74 233 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 A0A1B0GU03 582 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 SMIM28A0A1B0GU29 152 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 A0A1B0GVI7 797 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 A6NDN8 102 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 DHRS7CA6NNS2 312 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 FAM166BA8MTA8 275 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 FOXI3A8MTJ6 420 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ANKRD63C9JTQ0 380 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 G3V2L1 256 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 K7ENP7 123 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 K7EQG2 157 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 SLC16A4O15374 487 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ERI3O43414 337 aaKnown RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ENSAO43768 121 aaKnown RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ADAP1O75689 374 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 SLC2A10O95528 541 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 SNAP29O95721 258 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 TBX6O95947 436 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 HPRT1P00492 218 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 GCGP01275 180 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 APOEP02649 317 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 OR8U9P0C7N5 309 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 CT45A10P0DMU9 189 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 IGFBP3P17936 291 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 RAB4AP20338 218 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 CXCR2P25025 360 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 MARK3P27448 753 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ARL2P36404 184 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 KIR2DS2P43631 304 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 KIR2DS4P43632 304 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 CSNK1DP48730 415 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 VEGFCP49767 419 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 RAP1GDS1P52306 607 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 SUB1P53999 127 aaKnown RBP eCLIP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 DSCR9P59020 149 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 AP3S2P59780 193 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 PAFAH1B2P68402 229 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 BNIP2Q12982 314 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 SLC39A6Q13433 755 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ASAH1Q13510 395 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 CLINT1Q14677 625 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ABRAXAS2Q15018 415 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ZNF146Q15072 292 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 OR7A5Q15622 319 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 LTB4RQ15722 352 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 POU2AF1Q16633 256 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 IMPG1Q17R60 797 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 KLF17Q5JT82 389 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 GPRC6AQ5T6X5 926 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ZNF658Q5TYW1 1059 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 RESP18Q5W5W9 173 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 OR5M10Q6IEU7 315 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 C11orf71Q6IPW1 123 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ZNF571Q7Z3V5 609 aaPredicted RBP2.49□□□□□ -2.01
KPNB1-208ENST00000580019 PPP1R27Q86WC6 154 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 HORMAD1Q86X24 394 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 ZFAND4Q86XD8 727 aa2.49□□□□□ -2.01
KPNB1-208ENST00000580019 PGAM4Q8N0Y7 254 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms