RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SPRYD4Q8WW59 207 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 UBE2FQ969M7 185 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 C12orf43Q96C57 262 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 NUAK2Q9H093 628 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 RNPEPL1Q9HAU8 725 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 CAPN7Q9Y6W3 813 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 A0A1B0GVI7 797 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 BTBD17A6NE02 478 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 GSTA4O15217 222 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 GPR137BO60478 399 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 TIPRLO75663 272 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 MUC1P15941 1255 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 IFNGR2P38484 337 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 IER3P46695 156 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 CD83Q01151 205 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 GK2Q14410 553 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 RPL13AP3Q6NVV1 102 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 C1orf94Q6P1W5 598 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 DRAM2Q6UX65 266 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 REC114Q7Z4M0 266 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 CMTM4Q8IZR5 234 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 HSH2DQ96JZ2 352 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 CHIAQ9BZP6 476 aa9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 PDP1Q9P0J1 537 aaPredicted RBP9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 PRPF19Q9UMS4 504 aaKnown RBP9.31□□□□□ -0.92
SMARCE1-214ENST00000578112 H0YL77 283 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 NOS3P29474 1203 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 OTX1P32242 354 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 MDH1P40925 334 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 BLVRAP53004 296 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 RFX4Q33E94 735 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 C1orf122Q6ZSJ8 110 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 LY6G5BQ8NDX9 201 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 CYB5R1Q9UHQ9 305 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 SAMD4AQ9UPU9 718 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 IER3IP1Q9Y5U9 82 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 MDFIC2A0A1B0GVS7 189 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 XRCC2O43543 280 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 DBHP09172 617 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 HAAOP46952 286 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 LIPEQ05469 1076 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 C8orf82Q6P1X6 216 aaPredicted RBP9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 LYPD2Q6UXB3 125 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 SPARTQ8N0X7 666 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 LINC01006Q8NI28 216 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 C8orf46Q8TAG6 207 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 SLC7A13Q8TCU3 470 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 SLC7A6Q92536 515 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 FAM46AQ96IP4 442 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 TECTBQ96PL2 329 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 FUZQ9BT04 418 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 ADAT1Q9BUB4 502 aaKnown RBP9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 CDADC1Q9BWV3 514 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 CNTD2Q9H8S5 307 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 CMTM6Q9NX76 183 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 GTF2A1LQ9UNN4 478 aa9.3□□□□□ -0.92
SMARCE1-214ENST00000578112 IGHV3OR16-10A0A075B7F0 116 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 J3KTA2 159 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 LHBP01229 141 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 APOC1P02654 83 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 FBP1P09467 338 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 CFL1P23528 166 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 TGFBR2P37173 567 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 CDKN2AP42771 156 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 RELBQ01201 579 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 RSPO1Q2MKA7 263 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 FBLN7Q53RD9 439 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 BRD3OSQ6XYD6 125 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 PTCHD4Q6ZW05 846 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 FKBP9P1Q75LS8 142 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 HDXQ7Z353 690 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 TSEN54Q7Z6J9 526 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 VTCN1Q7Z7D3 282 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 LINC00471Q8N535 108 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 PITX2Q99697 317 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 PNRC2Q9NPJ4 139 aaKnown RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 CTSZQ9UBR2 303 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 SOCS2O14508 198 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 ADAM20O43506 726 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 ZNF682O95780 498 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 LCATP04180 440 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 NAA10P41227 235 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 AANATQ16613 207 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 FGD3Q5JSP0 725 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 KPRPQ5T749 579 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 SCCPDHQ8NBX0 429 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 SPSB4Q96A44 273 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 PCGF1Q9BSM1 259 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 RANBP3Q9H6Z4 567 aaPredicted RBP9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 MARCH7Q9H992 704 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 TCF7L1Q9HCS4 588 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 RHCGQ9UBD6 479 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 FBLN5Q9UBX5 448 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 VPREB3Q9UKI3 123 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 ARHGAP32A7KAX9 2087 aa9.29□□□□□ -0.92
SMARCE1-214ENST00000578112 M0R135 149 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 SERPINA1P01009 418 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 S100A1P23297 94 aa9.28□□□□□ -0.92
SMARCE1-214ENST00000578112 ACSM1Q08AH1 577 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms