RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CTAG2O75638 210 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CLPTM1O96005 669 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TTRP02766 147 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LCKP06239 509 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ATP6V1B1P15313 513 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GALP22466 123 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PRKXP51817 358 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GTF2A1P52655 376 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 BSPH1Q075Z2 132 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MED22Q15528 200 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 WDR38Q5JTN6 314 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF544Q6NX49 715 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 FBXW12Q6X9E4 464 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF704Q6ZNC4 412 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SPATC1Q76KD6 591 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 KLBQ86Z14 1044 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 WFDC8Q8IUA0 241 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF101Q8IZC7 436 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF283Q8N7M2 679 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR5L1Q8NGL2 311 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TMEM158Q8WZ71 300 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SGK3Q96BR1 496 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PGLYRP3Q96LB9 341 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OPALINQ96PE5 141 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PBOV1Q9GZY1 135 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OPA3Q9H6K4 179 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CDH20Q9HBT6 801 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PLEKHA6Q9Y2H5 1048 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SF3B6Q9Y3B4 125 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SPEF1Q9Y4P9 236 aa9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TRBV2A0A0J9YWF9 115 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 A0A1B0GTI1 187 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 DHRS7CA6NNS2 312 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SHISA9B4DS77 424 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LOC110117498-PIK3R3F6TDL0 507 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SMPD2O60906 423 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SC5DO75845 299 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZFPL1O95159 310 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 NGFP01138 241 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CCL2P13500 99 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF250P15622 560 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CFL1P23528 166 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 KIR3DL2P43630 455 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MFGE8Q08431 387 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TRAM1Q15629 374 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TIGD6Q17RP2 521 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SNAI3Q3KNW1 292 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ARMCX4Q5H9R4 360 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TMEM244Q5VVB8 128 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MBNL2Q5VZF2 373 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CD200R1LQ6Q8B3 271 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 UNQ9370/PRO34162Q6UXP9 181 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MS4A15Q8N5U1 240 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR8B12Q8NGG6 310 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 C10orf35Q96D05 121 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PLPPR2Q96GM1 343 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 MARS2Q96GW9 593 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZC3HAV1LQ96H79 300 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TTTY10Q9BZA0 68 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR10A2Q9H208 303 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 HEATR1Q9H583 2144 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF442Q9H7R0 627 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 VCX3AQ9NNX9 186 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 STARD10Q9Y365 291 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GRIP1Q9Y3R0 1128 aa9.57□□□□□ -0.88
CDK5RAP3-204ENST00000577664 HRNRQ86YZ3 2850 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 A0A1B0GWJ7 208 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ABCD4O14678 606 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 INMTO95050 263 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RPP14O95059 124 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LCATP04180 440 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CD3EP07766 207 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 UBCP0CG48 685 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RAC2P15153 192 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF12P17014 697 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 CELP19835 753 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ANOS1P23352 680 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 DDOSTP39656 456 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PSMB10P40306 273 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RPL5P46777 297 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 EVX1P49640 407 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GP2P55259 537 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 RPS11P62280 158 aaKnown RBP eCLIP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SNTB1Q13884 538 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 DEFB113Q30KQ7 82 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 YIF1BQ5BJH7 314 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 FAM57BQ71RH2 274 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR13F1Q8NGS4 319 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 OR5AK2Q8NH90 309 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LILRB1Q8NHL6 650 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 TMEM171Q8WVE6 324 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 GHSRQ92847 366 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 PPP1R14AQ96A00 147 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 HAVCR1Q96D42 359 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 LYZL4Q96KX0 146 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SCOCQ9UIL1 159 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 SLC22A13Q9Y226 551 aa9.56□□□□□ -0.88
CDK5RAP3-204ENST00000577664 ZNF281Q9Y2X9 895 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms