RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 RNASEK-C17orf49H0YIS7 233 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 BHLHE40O14503 412 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 NPFFO15130 113 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 GPR37O15354 613 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 EDF1O60869 148 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 GRK5P34947 590 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 DGCR6Q14129 220 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 MICBQ29980 383 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 FGD3Q5JSP0 725 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 TEX36Q5VZQ5 186 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 SLC35E4Q6ICL7 350 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 SMARCD3Q6STE5 483 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 SLC36A1Q7Z2H8 476 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 ARPINQ7Z6K5 226 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 NAA40Q86UY6 237 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR6V1Q8N148 313 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 LY6G5BQ8NDX9 201 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 ERMAPQ96PL5 475 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 PPA2Q9H2U2 334 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 OPA3Q9H6K4 179 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 SIRT7Q9NRC8 400 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 CYB5R1Q9UHQ9 305 aa9.57□□□□□ -0.88
CTDNEP1-212ENST00000576613 IGHV3OR15-7A0A075B7D8 119 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 UNC119BA6NIH7 251 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 CXCR6O00574 342 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 GSTA4O15217 222 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 FCN3O75636 299 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 LHBP01229 141 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 PRB2P02812 416 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 H1F0P07305 194 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 TROVE2P10155 538 aaKnown RBP eCLIP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 MUC1P15941 1255 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 SAA4P35542 130 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 OMPP47874 163 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 FXYD6P3P58550 94 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 ZNF92Q03936 586 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 KLF10Q13118 480 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 RFX4Q33E94 735 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 SNAI3Q3KNW1 292 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 ZNF826PQ6ZT77 177 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 CBLL1Q75N03 491 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR8S1Q8NH09 359 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR2AE1Q8NHA4 323 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 FANK1Q8TC84 345 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 MRAPQ8TCY5 172 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 NMNAT3Q96T66 252 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 PNRC2Q9NPJ4 139 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 RPRD1BQ9NQG5 326 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 KCNG2Q9UJ96 466 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 FAM32AQ9Y421 112 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 ENPP4Q9Y6X5 453 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 PLXNB1O43157 2135 aa9.56□□□□□ -0.88
CTDNEP1-212ENST00000576613 LOC100653049A0A140TA62 436 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 MEIOCA2RUB1 952 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 NDUFB3O43676 98 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 KRT34O76011 436 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 SERPINA1P01009 418 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 ZNF823P16415 610 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 NOS3P29474 1203 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 SLC6A6P31641 620 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 ACSM1Q08AH1 577 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 POU4F2Q12837 409 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 PCK2Q16822 640 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 LRRC10Q5BKY1 277 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 WDR38Q5JTN6 314 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 GLYATL3Q5SZD4 288 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 NCR3LG1Q68D85 454 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 DRAM2Q6UX65 266 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 ZBTB46Q86UZ6 589 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 LNX2Q8N448 690 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR4C15Q8NGM1 316 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR4C13Q8NGP0 309 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 C12orf43Q96C57 262 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 CCL13Q99616 98 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 NSRP1Q9H0G5 558 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 FAM234AQ9H0X4 552 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 RNPEPL1Q9HAU8 725 aa9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 PRPF19Q9UMS4 504 aaKnown RBP9.55□□□□□ -0.88
CTDNEP1-212ENST00000576613 A0A1W2PRD5 423 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 A0A1W2PRF3 423 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 A0A1W2PRM7 423 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 ANKRD30BLA7E2S9 258 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 ARPC3O15145 178 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 XPNPEP2O43895 674 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 OTX1P32242 354 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 DDOSTP39656 456 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 NAA10P41227 235 aaPredicted RBP9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 EFNB2P52799 333 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 LOXL3P58215 753 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 LIPEQ05469 1076 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 FGFRL1Q8N441 504 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 FAM216BQ8N7L0 139 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 DTX3Q8N9I9 347 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR56B2PQ8NGI1 322 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR4K13Q8NH42 304 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR2T6Q8NHC8 308 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 LRRC29Q8WV35 223 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 H1FXQ92522 213 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms