RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	PRKX	P51817	358 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	TPTE	P56180	551 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	ADARB1	P78563	741 aa	Known RBP	11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	ZNF92	Q03936	586 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	SLC3A1	Q07837	685 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	IL18R1	Q13478	541 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	TEX30	Q5JUR7	227 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	FAM201A	Q5SY85	155 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	SPATC1	Q76KD6	591 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	OR2AE1	Q8NHA4	323 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	CYGB	Q8WWM9	190 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	TFAP2C	Q92754	450 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	RAB39B	Q96DA2	213 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	SLAMF6	Q96DU3	332 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	ZNF799	Q96GE5	643 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	AMELY	Q99218	206 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	APOL4	Q9BPW4	351 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	MMP26	Q9NRE1	261 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	CENPM	Q9NSP4	180 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	IMPAD1	Q9NX62	359 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	TVP23B	Q9NYZ1	205 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	OPN4	Q9UHM6	478 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	GMPPB	Q9Y5P6	360 aa		11.91	□□□□□ -0.5
EDC4-210	ENST00000575507	TRAPPC2L	H3BP13	241 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	MPZL2	O60487	215 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	CYB5R3	P00387	301 aa	Predicted RBP	11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	PNP	P00491	289 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	EFNB1	P98172	346 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	GLYATL3	Q5SZD4	288 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	PEG10	Q86TG7	708 aa	Known RBP	11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	SETD9	Q8NE22	299 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	OR8J1	Q8NGP2	316 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	OR6K6	Q8NGW6	343 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	FAM81A	Q8TBF8	368 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	ZNF184	Q99676	751 aa	Predicted RBP	11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	REPIN1	Q9BWE0	567 aa	Known RBP	11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	MARCH7	Q9H992	704 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	PATZ1	Q9HBE1	687 aa	Known RBP	11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	TMEM165	Q9HC07	324 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	TMEM100	Q9NV29	134 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	METRN	Q9UJH8	293 aa		11.9	□□□□□ -0.5
EDC4-210	ENST00000575507	CD300LB	A8K4G0	201 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	PRR23D1	E9PI22	279 aa	Predicted RBP	11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	PRKY	O43930	277 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	VENTX	O95231	258 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	ADRA2C	P18825	462 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	SLC6A9	P48067	706 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	BTG1	P62324	171 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	MPPED2	Q15777	294 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	DRAM2	Q6UX65	266 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	PGAP1	Q75T13	922 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	DPY19L4	Q7Z388	723 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	MOGAT3	Q86VF5	341 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	TIGD4	Q8IY51	512 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	TMEM163	Q8TC26	289 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	SPTSSA	Q969W0	71 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	KCNJ15	Q99712	375 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	ABHD6	Q9BV23	337 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	C19orf24	Q9BVV8	132 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	ZNF319	Q9P2F9	582 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	RAB26	Q9ULW5	256 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	N6AMT1	Q9Y5N5	214 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	HSPE1-MOB4	S4R3N1	261 aa		11.89	□□□□□ -0.51
EDC4-210	ENST00000575507	ATR	Q13535	2644 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507		F5H0A9	414 aa	Predicted RBP	11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	WNT2	P09544	360 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	PCMT1	P22061	227 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	CA6	P23280	308 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	GSTT1	P30711	240 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	SNRPG	P62308	76 aa	Known RBP	11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	MALL	Q13021	153 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	EIF2B1	Q14232	305 aa	Known RBP	11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	TMEM155	Q4W5P6	130 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	SLC25A30	Q5SVS4	291 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	ZNF691	Q5VV52	312 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	DCAF12L2	Q5VW00	463 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	PRAMEF6	Q5VXH4	476 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	PLBD1	Q6P4A8	553 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	PRSS45	Q7RTY3	260 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	MRPL21	Q7Z2W9	205 aa	Known RBP	11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	RFLNB	Q8N5W9	214 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	TCEANC	Q8N8B7	351 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	C19orf18	Q8NEA5	215 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	BBS1	Q8NFJ9	593 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	DVL3	Q92997	716 aa	Predicted RBP	11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	OTULIN	Q96BN8	352 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	ZMYND19	Q96E35	227 aa	Predicted RBP	11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	COPS4	Q9BT78	406 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	OR51V1	Q9H2C8	321 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	PPP1R3E	Q9H7J1	279 aa		11.88	□□□□□ -0.51
EDC4-210	ENST00000575507	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.88	□□□□□ -0.51	2e-8	■■■■□ 25.3
EDC4-210	ENST00000575507	CEACAM18	A8MTB9	384 aa		11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	PRODH	O43272	600 aa		11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	RGS9	O75916	674 aa	Predicted RBP	11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	GLCE	O94923	617 aa		11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	GATA4	P43694	442 aa		11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	SRP9	P49458	86 aa	Known RBP	11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	BLVRA	P53004	296 aa		11.87	□□□□□ -0.51
EDC4-210	ENST00000575507	HCCS	P53701	268 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms