RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 KCNJ8Q15842 424 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 PIGWQ7Z7B1 504 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 FITM2Q8N6M3 262 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 OR56B2PQ8NGI1 322 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 OR4Q3Q8NH05 313 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 ARMC1Q9NVT9 282 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 C1orf123Q9NWV4 160 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 MRPL15Q9P015 296 aaKnown RBP17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 SAMHD1Q9Y3Z3 626 aaKnown RBP17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 U3KQV3 271 aa17.6■□□□□ 0.41
CHRNB1-206ENST00000574054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 A6NLC8 198 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 GRPP07492 148 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 CLUP10909 449 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 SPI1P17947 270 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 SHISA2Q6UWI4 295 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 BRD3OSQ6XYD6 125 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 ZNF841Q6ZN19 808 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 OR2T33Q8NG76 320 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 KCNJ15Q99712 375 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 REEP1Q9H902 201 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 VNN3Q9NY84 501 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 ERVK-18Q9QC07 812 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 BAIAP2Q9UQB8 552 aa17.59■□□□□ 0.41
CHRNB1-206ENST00000574054 hCG_1807616A0A1W2PRN6 198 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 TCRBV5S2A0A599 114 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 RIIAD1A6NNX1 92 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 B2RBV5 119 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 ZNF878C9JN71 531 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 CLDN34H7C241 214 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 TBX1O43435 398 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 ADAM20O43506 726 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 IFNGP01579 166 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 PSMB10P40306 273 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 SLC25A1P53007 311 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 GPR157Q5UAW9 335 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 OR2T5Q6IEZ7 315 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 DHFR2Q86XF0 187 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 SPERTQ8NA61 448 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 OR2T29Q8NH02 315 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 TAF15Q92804 592 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 ZDHHC16Q969W1 377 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 PCGF1Q9BSM1 259 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 MAGIXQ9H6Y5 334 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 UNKLQ9H9P5 680 aaKnown RBP17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 CTSZQ9UBR2 303 aa17.58■□□□□ 0.4
CHRNB1-206ENST00000574054 DHRS12A0PJE2 317 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 TMPRSS2O15393 492 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 XRCC2O43543 280 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 CX3CR1P49238 355 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 NPY4RP50391 375 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 MZT1Q08AG7 82 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 EIF2B1Q14232 305 aaKnown RBP17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 MICAQ29983 383 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 DEFB112Q30KQ8 113 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 CD276Q5ZPR3 534 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 ZNF826PQ6ZT77 177 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 PLPP7Q8NBV4 271 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 OTULINQ96BN8 352 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 NMNAT2Q9BZQ4 307 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 OPA3Q9H6K4 179 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 TRIM36Q9NQ86 728 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 KIF17Q9P2E2 1029 aa17.57■□□□□ 0.4
CHRNB1-206ENST00000574054 TRAV38-1A0A0B4J264 116 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 OOEPA6NGQ2 149 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 ANKRD30BLA7E2S9 258 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 PTBP3O95758 552 aaKnown RBP17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 GYPAP02724 150 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 ANXA2P07355 339 aaKnown RBP17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 ZNF3P17036 446 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 SLC15A1P46059 708 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 GRB2P62993 217 aaKnown RBP17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 IL13RA1P78552 427 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 PCK2Q16822 640 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 TIGD6Q17RP2 521 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 FAM98BQ52LJ0 330 aaKnown RBP17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 TEX30Q5JUR7 227 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 LCN8Q6JVE9 175 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 OR8S1Q8NH09 359 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 NSL1Q96IY1 281 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 DGCR6LQ9BY27 220 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 MUC13Q9H3R2 512 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 MED20Q9H944 212 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 TNFRSF19Q9NS68 423 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 C14orf119Q9NWQ9 140 aa17.56■□□□□ 0.4
CHRNB1-206ENST00000574054 TRRAPQ9Y4A5 3859 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 HOXA3O43365 443 aaPredicted RBP17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 SFTPBP07988 381 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 HSD11B1P28845 292 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 CFHR2P36980 270 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 BLVRAP53004 296 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 RUSC1-AS1Q66K80 236 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 ERI1Q8IV48 349 aaKnown RBP17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 ARHGAP24Q8N264 748 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 IQCF1Q8N6M8 205 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 OR10G2Q8NGC3 310 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 OR6N2Q8NGY6 317 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 TEX47Q8TBZ9 253 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 INTS14Q96SY0 518 aa17.55■□□□□ 0.4
CHRNB1-206ENST00000574054 RASSF4Q9H2L5 321 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms