RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TAF15Q92804 592 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPAIN-214ENST00000574003 SGK3Q96BR1 496 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 INTS14Q96SY0 518 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 ABHD6Q9BV23 337 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 C1orf21Q9H246 121 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 AUP1Q9Y679 476 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 NBEAL1Q6ZS30 2694 aa9.46□□□□□ -0.9
RPAIN-214ENST00000574003 IGHV3OR15-7A0A075B7D8 119 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF878C9JN71 531 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 GYG2O15488 501 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 FKBP6O75344 327 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 E2F6O75461 281 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 GLCEO94923 617 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 EGR1P18146 543 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 GATA3P23771 443 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 NAA10P41227 235 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-214ENST00000574003 GATA4P43694 442 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF121P58317 390 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-214ENST00000574003 GNB2P62879 340 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 ACTG1P63261 375 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 CBX1P83916 185 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 PAX8Q06710 450 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 FLOT2Q14254 428 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 GFOD2Q3B7J2 385 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 KLHL12Q53G59 568 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 ARMCX4Q5H9R4 360 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 TEX30Q5JUR7 227 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 WDR86Q86TI4 376 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 CPOQ8IVL8 374 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 TIGD4Q8IY51 512 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 MUC20Q8N307 709 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-214ENST00000574003 NEIL1Q96FI4 390 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF48Q96MX3 618 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-214ENST00000574003 RASSF4Q9H2L5 321 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 NTN4Q9HB63 628 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 C1orf123Q9NWV4 160 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 CTSZQ9UBR2 303 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 OR5V1Q9UGF6 321 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 POMPQ9Y244 141 aa9.45□□□□□ -0.9
RPAIN-214ENST00000574003 POLR3KQ9Y2Y1 108 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-214ENST00000574003 A0A0A6YYJ9 748 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 PPIAL4CA0A0B4J2A2 164 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 MDFIC2A0A1B0GVS7 189 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 A0A1B0GW55 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 TCRBV3S1A0A5B6 114 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 A6NLC8 198 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 LRRC30A6NM36 301 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 C22orf46C9J442 243 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 IFNL4K9M1U5 179 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 M0R129 80 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 FCN3O75636 299 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 TIPRLO75663 272 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L2P0CJ85 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L3P0CJ86 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L4P0CJ87 422 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L5P0CJ88 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L6P0CJ89 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L7P0CJ90 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 IRF2P14316 349 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 HSD11B1P28845 292 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 PITPNBP48739 271 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 FAM3AP98173 230 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF181Q2M3W8 571 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4L9Q6RFH8 374 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-214ENST00000574003 C12orf54Q6X4T0 127 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF841Q6ZN19 808 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 SLC16A9Q7RTY1 509 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 PRSS45Q7RTY3 260 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 FGFRL1Q8N441 504 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 OR8B3Q8NGG8 313 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 OR11L1Q8NGX0 322 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 Q8TCH9 128 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 THEM6Q8WUY1 208 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 RNF133Q8WVZ7 376 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 POP5Q969H6 163 aaKnown RBP9.44□□□□□ -0.9
RPAIN-214ENST00000574003 SEH1LQ96EE3 360 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 REEP6Q96HR9 211 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 C1orf147Q96MC9 270 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-214ENST00000574003 OR8B2Q96RD0 313 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 CADM1Q9BY67 442 aaKnown RBP9.44□□□□□ -0.9
RPAIN-214ENST00000574003 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-214ENST00000574003 MARCH7Q9H992 704 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 RNF7Q9UBF6 113 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 DUX4Q9UBX2 424 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 MIOXQ9UGB7 285 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 NUP50Q9UKX7 468 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 LRCH1Q9Y2L9 728 aa9.44□□□□□ -0.9
RPAIN-214ENST00000574003 IGHV2-70DA0A0C4DH43 119 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 hCG_38984A0A1B0GV85 526 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 ARRDC5A6NEK1 342 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 PRR23D1E9PI22 279 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 TRIM77I1YAP6 450 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 PSMD9O00233 223 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 GYPAP02724 150 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 PRR23D2P0DMB1 279 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 OSMP13725 252 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 OPRL1P41146 370 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 UBA52P62987 128 aaKnown RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 GRB2P62993 217 aaKnown RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 CSNK2BP67870 215 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms