RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 TOX3O15405 576 aaPredicted RBP12.56□□□□□ -0.4
GCOM1-213ENST00000569945 HCRTR1O43613 425 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 OR2C1O95371 312 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 STATHP02808 62 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 IL2RGP31785 369 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 SERPINF1P36955 418 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 GPR3P46089 330 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 IL13RA1P78552 427 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 EIF5AL1Q6IS14 154 aaKnown RBP12.56□□□□□ -0.4
GCOM1-213ENST00000569945 Q6ZRG5 221 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 BPIFA2Q96DR5 249 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 POM121Q96HA1 1249 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 NOL4LQ96MY1 436 aaPredicted RBP12.56□□□□□ -0.4
GCOM1-213ENST00000569945 KCNK15Q9H427 330 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 ZNF443Q9Y2A4 671 aaPredicted RBP12.56□□□□□ -0.4
GCOM1-213ENST00000569945 ATG4BQ9Y4P1 393 aa12.56□□□□□ -0.4
GCOM1-213ENST00000569945 EIF1AYO14602 144 aaKnown RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 DOK2O60496 412 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 MAS1P04201 325 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 CTSBP07858 339 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 ACP1P24666 158 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SNCAP37840 140 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 EIF1AXP47813 144 aaKnown RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SOX2P48431 317 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 DUSP2Q05923 314 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 KIR2DS3Q14952 304 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 TMEM268Q5VZI3 342 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 FCRL6Q6DN72 434 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 BHLHE23Q8NDY6 225 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 ST7LQ8TDW4 575 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SLC25A43Q8WUT9 341 aaPredicted RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SLC17A5Q9NRA2 495 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 C19orf12Q9NSK7 152 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 VSX1Q9NZR4 365 aaPredicted RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 CALML5Q9NZT1 146 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 PRODH2Q9UF12 536 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 ZNF107Q9UII5 783 aaPredicted RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SERTAD3Q9UJW9 196 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 COL5A1P20908 1838 aaPredicted RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 TRBV5-7A0A0A0MS05 114 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 IGHV5-51A0A0C4DH38 117 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 EDN3P14138 238 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 PNLIPP16233 465 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 S1PR1P21453 382 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 CX3CR1P49238 355 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 PDX1P52945 283 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 FHL1Q13642 323 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SCGB2B2Q4G0G5 96 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 HIST2H3PS2Q5TEC6 136 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 ARHGAP40Q5TG30 622 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 RPL7L1Q6DKI1 246 aaKnown RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 ARMC6Q6NXE6 501 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 FAHD2BQ6P2I3 314 aaPredicted RBP12.55□□□□□ -0.4
GCOM1-213ENST00000569945 PRSS54Q6PEW0 395 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 ZNF836Q6ZNA1 936 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 KCTD9Q7L273 389 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 UBE3DQ7Z6J8 389 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 C17orf64Q86WR6 236 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 CCDC116Q8IYX3 515 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 OR2L5Q8NG80 312 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 OR51A7Q8NH64 312 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 NAT6Q93015 286 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 FAHD2AQ96GK7 314 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 Q96M85 177 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 TAF9BQ9HBM6 251 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 FAM60AQ9NP50 221 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 TMED7Q9Y3B3 224 aa12.55□□□□□ -0.4
GCOM1-213ENST00000569945 SPTBP11277 2137 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 SPAARA0A1B0GVQ0 90 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 C5orf51A6NDU8 294 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 ZNF736B4DX44 427 aaPredicted RBP12.54□□□□□ -0.4
GCOM1-213ENST00000569945 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 PSMD9O00233 223 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 DUX1O43812 170 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 DUS4LO95620 317 aaKnown RBP12.54□□□□□ -0.4
GCOM1-213ENST00000569945 PTBP3O95758 552 aaKnown RBP12.54□□□□□ -0.4
GCOM1-213ENST00000569945 ZNF28P17035 718 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 DIO1P49895 249 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 EIF5AP63241 154 aaKnown RBP12.54□□□□□ -0.4
GCOM1-213ENST00000569945 CSNK1G2P78368 415 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 SSPNQ14714 243 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 OR4C11Q6IEV9 310 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 ARHGAP11AQ6P4F7 1023 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 ZDHHC22Q8N966 263 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 RCBTB1Q8NDN9 531 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 OR56A1Q8NGH5 318 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 OR52E2Q8NGJ4 325 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 MACROD1Q9BQ69 325 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 CDC40O60508 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
GCOM1-213ENST00000569945 CTSVO60911 334 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 OR8G3PP0DMU2 310 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 TACR3P29371 465 aa12.54□□□□□ -0.4
GCOM1-213ENST00000569945 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
GCOM1-213ENST00000569945 GUK1Q16774 197 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms