RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 RAD23AP54725 363 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 PSMA6P60900 246 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 FAM3AP98173 230 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 HNRNPA0Q13151 305 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 MAB21L1Q13394 359 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 KCTD18Q6PI47 426 aaPredicted RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 FAM57BQ71RH2 274 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 CELF2-AS1Q8N7Q2 184 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 TRUB1Q8WWH5 349 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 REEP6Q96HR9 211 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 MNTQ99583 582 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 SLC29A1Q99808 456 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 C9orf16Q9BUW7 83 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 ADGRL4Q9HBW9 690 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 DNAJC27Q9NZQ0 273 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 MRPL15Q9P015 296 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 WARS2Q9UGM6 360 aaKnown RBP9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 COPS3Q9UNS2 423 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 LRP12Q9Y561 859 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 N6AMT1Q9Y5N5 214 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 NPTNQ9Y639 398 aa9.34□□□□□ -0.91
SHCBP1-207ENST00000569702 hCG_38984A0A1B0GV85 526 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ACOD1A6NK06 481 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 B4DSR2 109 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 TMEM178BH3BS89 294 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 TBX1O43435 398 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF254O75437 659 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 IGHV2-70P01814 119 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 IGHV2-5P01817 119 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 SBK2P0C263 348 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 CFL1P23528 166 aaKnown RBP9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 HTR1FP30939 366 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 PMELP40967 661 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 CD200P41217 278 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 CDC42P60953 191 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 TIGD6Q17RP2 521 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF181Q2M3W8 571 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 SLC25A30Q5SVS4 291 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 PEG10Q86TG7 708 aaKnown RBP9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 KLBQ86Z14 1044 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF679Q8IYX0 411 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 RFLNBQ8N5W9 214 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 OR56B2PQ8NGI1 322 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ASB17Q8WXJ9 295 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 UBE2FQ969M7 185 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 EME1Q96AY2 570 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 PGAM5Q96HS1 289 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 OR8B4Q96RC9 309 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 MROQ9BYG7 248 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 OR10A2Q9H208 303 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 RGCCQ9H4X1 137 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF665Q9H7R5 613 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 BRD7Q9NPI1 651 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 CLN6Q9NWW5 311 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 KCNS2Q9ULS6 477 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 NOP16Q9Y3C1 178 aaKnown RBP9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 ORC6Q9Y5N6 252 aa9.33□□□□□ -0.92
SHCBP1-207ENST00000569702 PSMD9O00233 223 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 FSTL3O95633 263 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 MSMBP08118 114 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 GSK3AP49840 483 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 DVL1P1P54792 670 aaPredicted RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 CXCR4P61073 352 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 SNRPGP62308 76 aaKnown RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 POU4F2Q12837 409 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 TMED1Q13445 227 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 OR8G1Q15617 311 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 OR8B8Q15620 311 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ZIK1Q3SY52 487 aaPredicted RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 CHRFAM7AQ494W8 412 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 TMEM155Q4W5P6 130 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF322Q6U7Q0 402 aaPredicted RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ZBTB49Q6ZSB9 765 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 MOGAT3Q86VF5 341 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 LRRC28Q86X40 367 aaPredicted RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 PRIMA1Q86XR5 153 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 SLC35F2Q8IXU6 374 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 OR8B12Q8NGG6 310 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF420Q8TAQ5 688 aaPredicted RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 FAM81AQ8TBF8 368 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 Q8TCH9 128 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ERGIC1Q969X5 290 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 RAB39BQ96DA2 213 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 LYZL4Q96KX0 146 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 MBOAT4Q96T53 435 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ADAT1Q9BUB4 502 aaKnown RBP9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 FAM206AQ9NX38 181 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF391Q9UJN7 358 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 CDC42EP3Q9UKI2 254 aa9.32□□□□□ -0.92
SHCBP1-207ENST00000569702 IGHV3-64DA0A0J9YX35 117 aa9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 A0A0U1RQV5 110 aa9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 TMEM269A0A1B0GVZ9 245 aa9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 ISPDA4D126 451 aa9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 ZNF670-ZNF695F2Z2N8 137 aa9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 PHYHO14832 338 aa9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 SRSF10O75494 262 aaKnown RBP9.31□□□□□ -0.92
SHCBP1-207ENST00000569702 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms