RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 RNPEPL1Q9HAU8 725 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 SRA1Q9HD15 236 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 PNRC2Q9NPJ4 139 aaKnown RBP12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 C1orf123Q9NWV4 160 aa12.98□□□□□ -0.33
HERPUD1-215ENST00000568676 IDH3BO43837 385 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 OR10H3O60404 316 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 SERPINA1P01009 418 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 GYPAP02724 150 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC6A6P31641 620 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 DDOSTP39656 456 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 PRSS12P56730 875 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 LIPEQ05469 1076 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 MICBQ29980 383 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 RFX4Q33E94 735 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 FGD3Q5JSP0 725 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 DRAM2Q6UX65 266 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC36A1Q7Z2H8 476 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 LINC00346Q8IVM7 164 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 DTX3Q8N9I9 347 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 LY6G5BQ8NDX9 201 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 NMNAT3Q96T66 252 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 HOPXQ9BPY8 73 aaPredicted RBP12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 CMTM6Q9NX76 183 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 FBLN5Q9UBX5 448 aa12.97□□□□□ -0.33
HERPUD1-215ENST00000568676 ZNF816-ZNF321PA0A0X1KG74 233 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 hCG_1807616A0A1W2PRN6 198 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 A6NLC8 198 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 RNASEK-C17orf49H0YIS7 233 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 BHLHE40O14503 412 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 HLA-DQA2P01906 255 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 OPN1MWP04001 364 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 H2AFXP16104 143 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 OTX1P32242 354 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 BEAN1Q3B7T3 259 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 KPRPQ5T749 579 aaPredicted RBP12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 Q6ZTK2 550 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 NAA40Q86UY6 237 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 SLC15A3Q8IY34 581 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 FANK1Q8TC84 345 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 C12orf43Q96C57 262 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 RASSF4Q9H2L5 321 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 VIPAS39Q9H9C1 493 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 RPRD1BQ9NQG5 326 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 CAPN7Q9Y6W3 813 aa12.96□□□□□ -0.33
HERPUD1-215ENST00000568676 ANKRD61A6NGH8 418 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 TIPRLO75663 272 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 ALX3O95076 343 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 PAHP00439 452 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 GRPP07492 148 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 HIST1H1CP16403 213 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 ZNF823P16415 610 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 NOS3P29474 1203 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 SMIM11AP58511 58 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 ZNF92Q03936 586 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 EGR3Q06889 387 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 KRT72Q14CN4 511 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 HERPUD1Q15011 391 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 C1orf122Q6ZSJ8 110 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 RP9Q8TA86 221 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 FAM162AQ96A26 154 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 RCN3Q96D15 328 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 OR52D1Q9H346 318 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 NDUFAF4Q9P032 175 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 ONECUT1Q9UBC0 465 aa12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 PRPF19Q9UMS4 504 aaKnown RBP12.95□□□□□ -0.34
HERPUD1-215ENST00000568676 NPFFO15130 113 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 XRCC2O43543 280 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 NAA10P41227 235 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 HOXA4Q00056 320 aaPredicted RBP12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 SNAI3Q3KNW1 292 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 PDZD9Q8IXQ8 264 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 OR8S1Q8NH09 359 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 OR4K13Q8NH42 304 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 PPP1R14AQ96A00 147 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 MAP6Q96JE9 813 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 DHRS1Q96LJ7 313 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 DNTTIP1Q9H147 329 aa12.94□□□□□ -0.34
HERPUD1-215ENST00000568676 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 ANKRD30BLA7E2S9 258 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 PIN1P1O15428 100 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 NDUFB3O43676 98 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 FCN3O75636 299 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 GABRA5P31644 462 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 IFNGR2P38484 337 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 SLC7A2P52569 658 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 ACSM1Q08AH1 577 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 PCK2Q16822 640 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 LRRC10Q5BKY1 277 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 GLYATL3Q5SZD4 288 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 SAMD5Q5TGI4 173 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 NCR3LG1Q68D85 454 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 SLC35E4Q6ICL7 350 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 ZNF826PQ6ZT77 177 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 OR2AE1Q8NHA4 323 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 C8orf46Q8TAG6 207 aa12.93□□□□□ -0.34
HERPUD1-215ENST00000568676 FUZQ9BT04 418 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms