RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ZNF696Q9H7X3 374 aa10.16□□□□□ -0.78
GTF3C1-204ENST00000564664 NOX4Q9NPH5 578 aa10.16□□□□□ -0.78
GTF3C1-204ENST00000564664 KIF17Q9P2E2 1029 aa10.16□□□□□ -0.78
GTF3C1-204ENST00000564664 TVP23AA6NH52 213 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 B2RBV5 119 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 ZNF878C9JN71 531 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 P2RY10O00398 339 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 TNFRSF13BO14836 293 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 ECDO95905 644 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 IGHV4-38-2P0DP08 117 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 CFL1P23528 166 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 GRK5P34947 590 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 RBMXP38159 391 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 SLC9A3R2Q15599 337 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 MPPED2Q15777 294 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 SNAI3Q3KNW1 292 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 FAM201AQ5SY85 155 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 GPR157Q5UAW9 335 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 OR2T5Q6IEZ7 315 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 LCN8Q6JVE9 175 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 C16orf87Q6PH81 154 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 CYP2R1Q6VVX0 501 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 PNLDC1Q8NA58 520 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 AQP11Q8NBQ7 271 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 OR2T29Q8NH02 315 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 SLAMF6Q96DU3 332 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 ZNF48Q96MX3 618 aaPredicted RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 ADAT1Q9BUB4 502 aaKnown RBP10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 REEP1Q9H902 201 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 CENPMQ9NSP4 180 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 TBC1D23Q9NUY8 699 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 COMMD3-BMI1R4GMX3 469 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 MGAM2Q2M2H8 2515 aa10.15□□□□□ -0.78
GTF3C1-204ENST00000564664 IGHV3-64DA0A0J9YX35 117 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 A0A1B0GUS0 222 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 TCRBV5S2A0A599 114 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 OOEPA6NGQ2 149 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 RIIAD1A6NNX1 92 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 ANKRD30BLA7E2S9 258 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 TIPRLO75663 272 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 LHBP01229 141 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 SPARCP09486 303 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 ZNF3P17036 446 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 SPI1P17947 270 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 PRR31Q5SQ13 230 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 GLYATL3Q5SZD4 288 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 PRAMEF6Q5VXH4 476 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 LYPD2Q6UXB3 125 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 SHFQ7M4L6 423 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 TMEM86BQ8N661 226 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 ZNF511Q8NB15 262 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 OR52H1Q8NGJ2 320 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 OR51L1Q8NGJ5 315 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 OR8D4Q8NGM9 314 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 ZNRF4Q8WWF5 429 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 ITFG2Q969R8 447 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 FAM71F1Q96KD3 344 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 C1orf147Q96MC9 270 aaPredicted RBP10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 SLITRK2Q9H156 845 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 RNPEPL1Q9HAU8 725 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 CMC2Q9NRP2 79 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 UFSP2Q9NUQ7 469 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 KAAG1Q9UBP8 84 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 SAMHD1Q9Y3Z3 626 aaKnown RBP10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 PCDHGB1Q9Y5G3 927 aa10.14□□□□□ -0.79
GTF3C1-204ENST00000564664 ARRDC5A6NEK1 342 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 ZNF879B4DU55 563 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 RAP2AP10114 183 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 MUC1P15941 1255 aaPredicted RBP10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 ATP6V1B2P21281 511 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 CALB2P22676 271 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 CFHR2P36980 270 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 RPS27P42677 84 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 PRKXP51817 358 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 FGF12P61328 243 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 CRMP1Q14194 572 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 PDCD1Q15116 288 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 OR8B8Q15620 311 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 FTMTQ8N4E7 242 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 OR9Q1Q8NGQ5 310 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 OR4Q3Q8NH05 313 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 OR2AE1Q8NHA4 323 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 RNF133Q8WVZ7 376 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 ZDHHC16Q969W1 377 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 C1orf21Q9H246 121 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 RGCCQ9H4X1 137 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 ABCB9Q9NP78 766 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 C1orf123Q9NWV4 160 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 PRPF19Q9UMS4 504 aaKnown RBP10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 MMP24Q9Y5R2 645 aa10.13□□□□□ -0.79
GTF3C1-204ENST00000564664 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 DHRS12A0PJE2 317 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 SRRM5B3KS81 715 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 GPR37O15354 613 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 TMPRSS2O15393 492 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 ADAM20O43506 726 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 GRPP07492 148 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 PAICSP22234 425 aaKnown RBP10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 HSD11B1P28845 292 aa10.12□□□□□ -0.79
GTF3C1-204ENST00000564664 NAA10P41227 235 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms