RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CDK5Q00535 292 aa21.18■□□□□ 0.98
AC009041.3-201ENST00000564390 CPOQ8IVL8 374 aa21.18■□□□□ 0.98
AC009041.3-201ENST00000564390 C1orf87Q8N0U7 546 aa21.18■□□□□ 0.98
AC009041.3-201ENST00000564390 CELF2-AS1Q8N7Q2 184 aa21.18■□□□□ 0.98
AC009041.3-201ENST00000564390 NANPQ8TBE9 248 aa21.18■□□□□ 0.98
AC009041.3-201ENST00000564390 BRD7Q9NPI1 651 aa21.18■□□□□ 0.98
AC009041.3-201ENST00000564390 PPIAL4EA0A075B759 164 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 PPIAL4CA0A0B4J2A2 164 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 PPIAL4DF5H284 164 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 XRCC2O43543 280 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 WNT2P09544 360 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 PPIAL4FP0DN26 164 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 NAA10P41227 235 aaPredicted RBP21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 ZNF121P58317 390 aaPredicted RBP21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 GFOD2Q3B7J2 385 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 ZNF404Q494X3 552 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 FAM57BQ71RH2 274 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 SHFQ7M4L6 423 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 KLBQ86Z14 1044 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 OR11L1Q8NGX0 322 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 Q8TCH9 128 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 PLEKHA8Q96JA3 519 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 SLC6A7Q99884 636 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 MRPL15Q9P015 296 aaKnown RBP21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 OR5V1Q9UGF6 321 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 LRCH1Q9Y2L9 728 aa21.17■□□□□ 0.98
AC009041.3-201ENST00000564390 FSHBP01225 129 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 HMGN1P05114 100 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 ZNF12P17014 697 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 OPRL1P41146 370 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 TIGD6Q17RP2 521 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 SLC16A9Q7RTY1 509 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 ZNF418Q8TF45 676 aaPredicted RBP21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 C22orf15Q8WYQ4 148 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 SPSB4Q96A44 273 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 SSBP3Q9BWW4 388 aaPredicted RBP21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 SLC22A4Q9H015 551 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 TOR3AQ9H497 397 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 OPA3Q9H6K4 179 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 SLC25A19Q9HC21 320 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 KLHDC2Q9Y2U9 406 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 POLR3KQ9Y2Y1 108 aaPredicted RBP21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 NOP16Q9Y3C1 178 aaKnown RBP21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 PPIAL4AQ9Y536 164 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 WNK2Q9Y3S1 2297 aa21.16■□□□□ 0.98
AC009041.3-201ENST00000564390 GMDSO60547 372 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 H2BFMP0C1H6 154 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 RPS7P62081 194 aaKnown RBP21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 ZNF154Q13106 437 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 PRSS45Q7RTY3 260 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 BOLLQ8N9W6 283 aaKnown RBP21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 THEM6Q8WUY1 208 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 REEP6Q96HR9 211 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 FN3KRPQ9HA64 309 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 PAPOLBQ9NRJ5 636 aaKnown RBP21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 ZNF319Q9P2F9 582 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 INSIG2Q9Y5U4 225 aa21.15■□□□□ 0.98
AC009041.3-201ENST00000564390 PRODHO43272 600 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 LYNP07948 512 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 CD80P33681 288 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 GNB2P62879 340 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 FAM3AP98173 230 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 LYPD2Q6UXB3 125 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 OTOSQ8NHW6 89 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 ERGIC1Q969X5 290 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 UTP4Q969X6 686 aaKnown RBP21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 SGK3Q96BR1 496 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 NEIL1Q96FI4 390 aaPredicted RBP21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 MIOXQ9UGB7 285 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 AUP1Q9Y679 476 aa21.14■□□□□ 0.97
AC009041.3-201ENST00000564390 A0A0A6YYJ9 748 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 hCG_38984A0A1B0GV85 526 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 GRPP07492 148 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 SLC2A5P22732 501 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 DAPP51397 102 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 ARMCX4Q5H9R4 360 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 FAHD1Q6P587 224 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 BPIFB2Q8N4F0 458 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 OR8B3Q8NGG8 313 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 PGAM5Q96HS1 289 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 OR8B2Q96RD0 313 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 MRI1Q9BV20 369 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 C1orf123Q9NWV4 160 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 TVP23BQ9NYZ1 205 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 RNF7Q9UBF6 113 aa21.13■□□□□ 0.97
AC009041.3-201ENST00000564390 A6NLC8 198 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 ANKRD30BLA7E2S9 258 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 M0R129 80 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 PTBP3O95758 552 aaKnown RBP21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 PITPNBP48739 271 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 CRISP1P54107 249 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 APOFQ13790 326 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 SNAPC1Q16533 368 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 SFRP4Q6FHJ7 346 aaPredicted RBP21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 LRRN1Q6UXK5 716 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 ZNF826PQ6ZT77 177 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 NRBF2Q96F24 287 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 OR10A2Q9H208 303 aa21.12■□□□□ 0.97
AC009041.3-201ENST00000564390 PPP1R3EQ9H7J1 279 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms