RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 STMN3Q9NZ72 180 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ZNF229Q9UJW7 825 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 CES1P1Q9UKY3 287 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 RBMX2Q9Y388 322 aaKnown RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 PLB1Q6P1J6 1458 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ADAMTS13Q76LX8 1427 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 IGKV1-8A0A0C4DH67 115 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OR6C74A6NCV1 312 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 A6NDX4 124 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ANKRD63C9JTQ0 380 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 INS-IGF2F8WCM5 200 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 DNASE2O00115 360 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 TCN2P20062 427 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 PRKACBP22694 351 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 UCNP55089 124 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 AP1S2P56377 157 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 PSG3Q16557 428 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ORMDL2Q53FV1 153 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 METTL21CQ5VZV1 264 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ZNF530Q6P9A1 599 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 SNX20Q7Z614 316 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SPATA24Q86W54 205 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 C11orf53Q8IXP5 236 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 C12orf56Q8IXR9 622 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 Q8N9W7 124 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OR11H7Q8NGC8 314 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 LRRC20Q8TCA0 184 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 TMEM234Q8WY98 164 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OR2A5Q96R48 311 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 TEAD3Q99594 435 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OSBPL11Q9BXB4 747 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 NOX3Q9HBY0 568 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 RRAGDQ9NQL2 400 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 TRMT112Q9UI30 125 aaKnown RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 TOPBP1Q92547 1522 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 GPATCH8Q9UKJ3 1502 aaKnown RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 YEATS2Q9ULM3 1422 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 LRP4O75096 1905 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 TRBV6-6A0A0A6YYG2 114 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 A0A1B0GVY2 172 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 WI2-2373I1.2A0A1W2PRP0 233 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SYCE1LA8MT33 242 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 VGLL3A8MV65 326 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 CTNSO60931 367 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 TRAPPC6AO75865 159 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SEMA3DO95025 777 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 GABARAPO95166 117 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 YEATS4O95619 227 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SLC25A27O95847 323 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 BCHEP06276 602 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 PRPS2P11908 318 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 PSMC3P17980 439 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ZNF266Q14584 549 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 IRF4Q15306 451 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 LCE3CQ5T5A8 94 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 CPTPQ5TA50 214 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 CYB5R2Q6BCY4 276 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 FAM92BQ6ZTR7 304 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 NCCRP1Q6ZVX7 275 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 RAB43Q86YS6 212 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 RNF175Q8N4F7 328 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 METTL13Q8N6R0 699 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ARIH2OSQ8N7S6 290 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 WDR31Q8NA23 367 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OR6K6Q8NGW6 343 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OR6N2Q8NGY6 317 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 PIFOQ8TCI5 191 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 CENPNQ96H22 339 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 CPB2Q96IY4 423 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 PRRG3Q9BZD7 231 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SLIRPQ9GZT3 109 aaKnown RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 ZNF442Q9H7R0 627 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SYNDIG1Q9H7V2 258 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ANKHQ9HCJ1 492 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 FBXO8Q9NRD0 319 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 V9GYY5 206 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 ADAMTSL3P82987 1691 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 MAP3K19Q56UN5 1328 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.68□□□□□ -2.14
CHD9-209ENST00000564255 A0A096LNJ9 63 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 A8MU10 97 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 TRIM49D1C9J1S8 452 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 PRMT5O14744 637 aaPredicted RBP1.68□□□□□ -2.14
CHD9-209ENST00000564255 CETN3O15182 167 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 RDH16O75452 317 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 CD37P11049 281 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 TCP1P17987 556 aaKnown RBP1.68□□□□□ -2.14
CHD9-209ENST00000564255 HTR1DP28221 377 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 RBM34P42696 430 aaKnown RBP1.68□□□□□ -2.14
CHD9-209ENST00000564255 CCR6P51684 374 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 NDUFA8P51970 172 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 CACNG7P62955 275 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 PAFAH1B2P68402 229 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 SLC35B1P78383 322 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 ARG2P78540 354 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 KDSRQ06136 332 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 ERCC8Q13216 396 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 GINS1Q14691 196 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 PRSS58Q8IYP2 241 aa1.68□□□□□ -2.14
CHD9-209ENST00000564255 TCAIMQ8N3R3 496 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms