RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 RADILQ96JH8 1075 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 PDCD1LG2Q9BQ51 273 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 TMED9Q9BVK6 235 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 TUBG2Q9NRH3 451 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 STARD10Q9Y365 291 aa14.62□□□□□ -0.07
CMTM3-208ENST00000564247 DPRXA6NFQ7 191 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 P2RY10O00398 339 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 SYT7O43581 403 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 ICMTO60725 284 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 HLA-DPB1P04440 258 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 ISG15P05161 165 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 FAM157BP0CG42 384 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 ACHEP22303 614 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 GABRA5P31644 462 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 SSX1Q16384 188 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 SNAI3Q3KNW1 292 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 TIMM50Q3ZCQ8 353 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 YIF1BQ5BJH7 314 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 PIAS4Q8N2W9 510 aaPredicted RBP14.61□□□□□ -0.07
CMTM3-208ENST00000564247 CCDC54Q8NEL0 328 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 OR1J1Q8NGS3 322 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 OR51E1Q8TCB6 317 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 GPR148Q8TDV2 347 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 TMEM203Q969S6 136 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 PLPPR2Q96GM1 343 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 REEP6Q96HR9 211 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 OR51B6Q9H340 312 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 LIME1Q9H400 295 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 PLEKHF2Q9H8W4 249 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 NDUFB11Q9NX14 153 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 HHLA2Q9UM44 414 aa14.61□□□□□ -0.07
CMTM3-208ENST00000564247 CADP27708 2225 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 VSTM5A8MXK1 200 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 SMPD2O60906 423 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 MTRF1O75570 445 aaKnown RBP14.6□□□□□ -0.07
CMTM3-208ENST00000564247 NGFP01138 241 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 CD3EP07766 207 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 NR4A1P22736 598 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 CALCRP30988 508 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 PPP1CBP62140 327 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 BSPH1Q075Z2 132 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 NCMAPQ5T1S8 102 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 SLC22A25Q6T423 547 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 DOK3Q7L591 496 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 SATL1Q86VE3 508 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 RDH10Q8IZV5 341 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 THRSPQ92748 146 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 ITFG2Q969R8 447 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 YIPF6Q96EC8 236 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 PGLYRP3Q96LB9 341 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 OPA3Q9H6K4 179 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 GPR84Q9NQS5 396 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 PTTG3PQ9NZH4 202 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF319Q9P2F9 582 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 SSR3Q9UNL2 185 aa14.6□□□□□ -0.07
CMTM3-208ENST00000564247 MAP1AP78559 2803 aaPredicted RBP14.59□□□□□ -0.07
CMTM3-208ENST00000564247 DEFB108AA8MXU0 73 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 ABCD4O14678 606 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 SIAH2O43255 324 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 RPS23P62266 143 aaKnown RBP14.59□□□□□ -0.07
CMTM3-208ENST00000564247 RPS25P62851 125 aaKnown RBP14.59□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF718Q3SXZ3 478 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 GLYATL3Q5SZD4 288 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 PAMR1Q6UXH9 720 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 SPNS3Q6ZMD2 512 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 MRPL21Q7Z2W9 205 aaKnown RBP14.59□□□□□ -0.07
CMTM3-208ENST00000564247 ZNF101Q8IZC7 436 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 TSEN15Q8WW01 171 aaKnown RBP14.59□□□□□ -0.07
CMTM3-208ENST00000564247 NDUFA13Q9P0J0 144 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 STUB1Q9UNE7 303 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 DHDHQ9UQ10 334 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 SF3B6Q9Y3B4 125 aaKnown RBP14.59□□□□□ -0.07
CMTM3-208ENST00000564247 ATP23Q9Y6H3 246 aa14.59□□□□□ -0.07
CMTM3-208ENST00000564247 HIVEP1P15822 2718 aa14.58□□□□□ -0.07
CMTM3-208ENST00000564247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.58□□□□□ -0.08
CMTM3-208ENST00000564247 LOC107986453A0A1B0GWG9 222 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 A0A1W2PPR1 153 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 RGS9O75916 674 aaPredicted RBP14.58□□□□□ -0.08
CMTM3-208ENST00000564247 CD2P06729 351 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 OCM2P0CE71 109 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 GALP22466 123 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 DNASE1P24855 282 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 GCH1P30793 250 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 GLRXP35754 106 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 TGFBR2P37173 567 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 MAP2K3P46734 347 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 ZNF92Q03936 586 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 ACSM3Q53FZ2 586 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 GPR107Q5VW38 600 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 GDPGP1Q6ZNW5 385 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 RFPL4BQ6ZWI9 263 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 PGAP1Q75T13 922 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 CEACAM19Q7Z692 300 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 CLVS1Q8IUQ0 354 aaPredicted RBP14.58□□□□□ -0.08
CMTM3-208ENST00000564247 OR13C3Q8NGS6 347 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 OR2AE1Q8NHA4 323 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 SLC25A40Q8TBP6 338 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 SPSB4Q96A44 273 aa14.58□□□□□ -0.08
CMTM3-208ENST00000564247 FAM71F1Q96KD3 344 aaPredicted RBP14.58□□□□□ -0.08
CMTM3-208ENST00000564247 FUNDC2Q9BWH2 189 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms