RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 OR4Q3Q8NH05 313 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 OR2AE1Q8NHA4 323 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 SLAMF6Q96DU3 332 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 COPS4Q9BT78 406 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 ADAT1Q9BUB4 502 aaKnown RBP14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 TRIM36Q9NQ86 728 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 UFSP2Q9NUQ7 469 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 TBC1D23Q9NUY8 699 aa14.33□□□□□ -0.12
VPS9D1-203ENST00000563798 GGT3PA6NGU5 568 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 B2RBV5 119 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 ZNF878C9JN71 531 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 XRCC2O43543 280 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 ENSAO43768 121 aaKnown RBP14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 LIPFP07098 398 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 GYS2P54840 703 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 MZT1Q08AG7 82 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 LINC01590Q5TEZ4 76 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 CD276Q5ZPR3 534 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 DHFR2Q86XF0 187 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 ZNF511Q8NB15 262 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 SLC25A28Q96A46 364 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 VNN3Q9NY84 501 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 DOCK11Q5JSL3 2073 aa14.32□□□□□ -0.12
VPS9D1-203ENST00000563798 TRAV40A0A0B4J280 105 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 C22orf46C9J442 243 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 LHBP01229 141 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 IFNGP01579 166 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 SPARCP09486 303 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 SLC15A1P46059 708 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 PRKXP51817 358 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 GRB2P62993 217 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 MS4A2Q01362 244 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 FAM98BQ52LJ0 330 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 PRR31Q5SQ13 230 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 PRSS45Q7RTY3 260 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 OR56B2PQ8NGI1 322 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 NSL1Q96IY1 281 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 DUX5Q96PT3 197 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 TOR3AQ9H497 397 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 ZNF696Q9H7X3 374 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 REEP1Q9H902 201 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 MARCH7Q9H992 704 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 CMC2Q9NRP2 79 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 ERVK-18Q9QC07 812 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 CTSZQ9UBR2 303 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 SAMHD1Q9Y3Z3 626 aaKnown RBP14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 PCDHGB1Q9Y5G3 927 aa14.31□□□□□ -0.12
VPS9D1-203ENST00000563798 MGAM2Q2M2H8 2515 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 TRAV38-1A0A0B4J264 116 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 DHRS12A0PJE2 317 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 ARRDC5A6NEK1 342 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 POM121CA8CG34 1229 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 GYPBP06028 91 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 FGF12P61328 243 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 IL13RA1P78552 427 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 PPP1R8Q12972 351 aaKnown RBP14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 TAF13Q15543 124 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 GCSAMQ8N6F7 178 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 C19orf18Q8NEA5 215 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 RNF133Q8WVZ7 376 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 SP140LQ9H930 580 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 CENPMQ9NSP4 180 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 ARMC1Q9NVT9 282 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 C14orf119Q9NWQ9 140 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 KAAG1Q9UBP8 84 aa14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 SOX21Q9Y651 276 aaPredicted RBP14.3□□□□□ -0.12
VPS9D1-203ENST00000563798 IGHV3OR16-10A0A075B7F0 116 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 OOEPA6NGQ2 149 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 RIIAD1A6NNX1 92 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 TMPRSS2O15393 492 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 SOX14O95416 240 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 APOC1P02654 83 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 CLUP10909 449 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 SLC2A1P11166 492 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 MMP9P14780 707 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 ZNF3P17036 446 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 GRK5P34947 590 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 FAM3AP98173 230 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 HOXA4Q00056 320 aaPredicted RBP14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 TEX36Q5VZQ5 186 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 SGK3Q96BR1 496 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 RNPEPL1Q9HAU8 725 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 NOX4Q9NPH5 578 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 C1orf123Q9NWV4 160 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 PRPF19Q9UMS4 504 aaKnown RBP14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 U3KQV3 271 aa14.29□□□□□ -0.12
VPS9D1-203ENST00000563798 ZNF879B4DU55 563 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 P2RY10O00398 339 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 T-ENOLP0DO92 83 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 RAP2AP10114 183 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 CALB2P22676 271 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 CFHR2P36980 270 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 CX3CR1P49238 355 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 GPR157Q5UAW9 335 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 SFRP4Q6FHJ7 346 aaPredicted RBP14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 C16orf87Q6PH81 154 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 SLC16A9Q7RTY1 509 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 C11orf53Q8IXP5 236 aa14.28□□□□□ -0.12
VPS9D1-203ENST00000563798 OR10G2Q8NGC3 310 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms