RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 NAT2P11245 290 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 SLC6A9P48067 706 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 RIDAP52758 137 aaKnown RBP13.34□□□□□ -0.27
USB1-208ENST00000563207 MALLQ13021 153 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 CR1LQ2VPA4 569 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 SPATC1Q76KD6 591 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 ZNF283Q8N7M2 679 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 OR10H4Q8NGA5 316 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 OR52H1Q8NGJ2 320 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 SLC25A40Q8TBP6 338 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 KLF14Q8TD94 323 aaPredicted RBP13.34□□□□□ -0.27
USB1-208ENST00000563207 NEU4Q8WWR8 484 aaPredicted RBP13.34□□□□□ -0.27
USB1-208ENST00000563207 LGALS12Q96DT0 336 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 ANKRD60Q9BZ19 345 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 OR2J1Q9GZK6 312 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 OPA3Q9H6K4 179 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 NARFLQ9H6Q4 476 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 MYOZ1Q9NP98 299 aaPredicted RBP13.34□□□□□ -0.27
USB1-208ENST00000563207 AASSQ9UDR5 926 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 CGGBP1Q9UFW8 167 aaPredicted RBP13.34□□□□□ -0.27
USB1-208ENST00000563207 COPS3Q9UNS2 423 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 KLHDC2Q9Y2U9 406 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 LRP12Q9Y561 859 aa13.34□□□□□ -0.27
USB1-208ENST00000563207 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.33□□□□□ -0.285e-11■■□□□ 11.9
USB1-208ENST00000563207 A0A1W2PQL4 384 aaPredicted RBP13.33□□□□□ -0.28
USB1-208ENST00000563207 KRT8P05787 483 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 TACSTD2P09758 323 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 RAC2P15153 192 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 SRD5A1P18405 259 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 MYF6P23409 242 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 LIPAP38571 399 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 CX3CR1P49238 355 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 PRKXP51817 358 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 SNCBQ16143 134 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 LRRN1Q6UXK5 716 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 FBXW12Q6X9E4 464 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 PLEKHG7Q6ZR37 379 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 KCTD20Q7Z5Y7 419 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 CNIH3Q8TBE1 160 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 TMEM158Q8WZ71 300 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
USB1-208ENST00000563207 YIPF5Q969M3 257 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 ITFG2Q969R8 447 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 C1orf159Q96HA4 380 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 MS4A5Q9H3V2 200 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 CYSLTR2Q9NS75 346 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 PLCXD1Q9NUJ7 323 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 DUSP13Q9UII6 198 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 ZNF391Q9UJN7 358 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 IKZF2Q9UKS7 526 aa13.33□□□□□ -0.28
USB1-208ENST00000563207 DAPL1A0PJW8 107 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 XRCC2O43543 280 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 IGHA1P01876 353 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 MT-ND5P03915 603 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 SELEP16581 610 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 CFL1P23528 166 aaKnown RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 DCKP27707 260 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 MMP16P51512 607 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 ACTA2P62736 377 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 ACTG2P63267 376 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 HNRNPA0Q13151 305 aaKnown RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 ZNF829Q3KNS6 432 aaPredicted RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 NAA40Q86UY6 237 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 SNX33Q8WV41 574 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 HAVCR1Q96D42 359 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 ZNF184Q99676 751 aaPredicted RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 JAM3Q9BX67 310 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 Q9H521 79 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 AMBNQ9NP70 447 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 FGF20Q9NP95 211 aaPredicted RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 CNOT2Q9NZN8 540 aaKnown RBP13.32□□□□□ -0.28
USB1-208ENST00000563207 LPAR3Q9UBY5 353 aa13.32□□□□□ -0.28
USB1-208ENST00000563207 EFCAB10A6NFE3 127 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 METTL15A6NJ78 407 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 M0R233 179 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 APOL3O95236 402 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 ANXA2P07355 339 aaKnown RBP13.31□□□□□ -0.28
USB1-208ENST00000563207 PIPP12273 146 aaPredicted RBP13.31□□□□□ -0.28
USB1-208ENST00000563207 KITLGP21583 273 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 RBMXP38159 391 aaKnown RBP13.31□□□□□ -0.28
USB1-208ENST00000563207 MAGEB1P43366 347 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 CHN2P52757 468 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 ZNF121P58317 390 aaPredicted RBP13.31□□□□□ -0.28
USB1-208ENST00000563207 PSG7Q13046 419 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 SMN1Q16637 294 aaKnown RBP13.31□□□□□ -0.28
USB1-208ENST00000563207 TMEM255AQ5JRV8 349 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 SPATA46Q5T0L3 261 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 ZNF684Q5T5D7 378 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 OR52I1Q8NGK6 324 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 TBX5Q99593 518 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 OR10A2Q9H208 303 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 MOB1AQ9H8S9 216 aa13.31□□□□□ -0.28
USB1-208ENST00000563207 TMEM269A0A1B0GVZ9 245 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 A0A1W2PPW3 197 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 ERCC1P07992 297 aaPredicted RBP13.3□□□□□ -0.28
USB1-208ENST00000563207 ZNF85Q03923 595 aa13.3□□□□□ -0.28
USB1-208ENST00000563207 MED21Q13503 144 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms