RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 GGT3PA6NGU5 568 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 AQP12BA6NM10 295 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 IFNL4K9M1U5 179 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 CD80P33681 288 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 ZNF181Q2M3W8 571 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 TEX30Q5JUR7 227 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 AQP12AQ8IXF9 295 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 BPIFB2Q8N4F0 458 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 SLC7A6OSQ96CW6 309 aaPredicted RBP21.11■□□□□ 0.97
NME3-202ENST00000561637 JMJD8Q96S16 334 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 SSBP3Q9BWW4 388 aaPredicted RBP21.11■□□□□ 0.97
NME3-202ENST00000561637 PPP1R3EQ9H7J1 279 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 ZNF69Q9UC07 566 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 AUP1Q9Y679 476 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 DOCK11Q5JSL3 2073 aa21.11■□□□□ 0.97
NME3-202ENST00000561637 ZNF878C9JN71 531 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 GSTT1P30711 240 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 CX3CR1P49238 355 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 GINS1Q14691 196 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 SPATA24Q86W54 205 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 TEX29Q8N6K0 151 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 BOLLQ8N9W6 283 aaKnown RBP21.1■□□□□ 0.97
NME3-202ENST00000561637 Q8TCH9 128 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 INTS14Q96SY0 518 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 ABHD6Q9BV23 337 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 OR51V1Q9H2C8 321 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 DNAJC27Q9NZQ0 273 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 ZNF319Q9P2F9 582 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 OR5V1Q9UGF6 321 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 LRCH1Q9Y2L9 728 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 PPIAL4AQ9Y536 164 aa21.1■□□□□ 0.97
NME3-202ENST00000561637 TBX1O43435 398 aa21.09■□□□□ 0.97
NME3-202ENST00000561637 SELENOFO60613 162 aa21.09■□□□□ 0.97
NME3-202ENST00000561637 PLBD1Q6P4A8 553 aa21.09■□□□□ 0.97
NME3-202ENST00000561637 ZNF826PQ6ZT77 177 aa21.09■□□□□ 0.97
NME3-202ENST00000561637 BBS1Q8NFJ9 593 aa21.09■□□□□ 0.97
NME3-202ENST00000561637 DACT3Q96B18 629 aaPredicted RBP21.09■□□□□ 0.97
NME3-202ENST00000561637 KLHDC2Q9Y2U9 406 aa21.09■□□□□ 0.97
NME3-202ENST00000561637 PRKDCP78527 4128 aaKnown RBP21.09■□□□□ 0.97
NME3-202ENST00000561637 ARRDC5A6NEK1 342 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 LRRC30A6NM36 301 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 GNGT2O14610 69 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 IGHV4-38-2P0DP08 117 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 PAX8Q06710 450 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 ARMCX4Q5H9R4 360 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 TMEM236Q5W0B7 351 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 PRSS45Q7RTY3 260 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 TIGD4Q8IY51 512 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 CELF2-AS1Q8N7Q2 184 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 SIGLECL1Q8N7X8 197 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 BCAS4Q8TDM0 211 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 NEIL1Q96FI4 390 aaPredicted RBP21.08■□□□□ 0.97
NME3-202ENST00000561637 DUX5Q96PT3 197 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 SUCNR1Q9BXA5 334 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 MARCH7Q9H992 704 aa21.08■□□□□ 0.97
NME3-202ENST00000561637 GYG2O15488 501 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 FKBP6O75344 327 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 GLCEO94923 617 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 ANXA2P07355 339 aaKnown RBP21.07■□□□□ 0.96
NME3-202ENST00000561637 PITPNBP48739 271 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 GNB2P62879 340 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 FLOT2Q14254 428 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 SFRP4Q6FHJ7 346 aaPredicted RBP21.07■□□□□ 0.96
NME3-202ENST00000561637 SHISA2Q6UWI4 295 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 FAM57BQ71RH2 274 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 SLC16A9Q7RTY1 509 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 WDR86Q86TI4 376 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 C1orf87Q8N0U7 546 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 OR11L1Q8NGX0 322 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 RNF133Q8WVZ7 376 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 POP5Q969H6 163 aaKnown RBP21.07■□□□□ 0.96
NME3-202ENST00000561637 SPSB4Q96A44 273 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 SGK3Q96BR1 496 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 ZNF48Q96MX3 618 aaPredicted RBP21.07■□□□□ 0.96
NME3-202ENST00000561637 BRD7Q9NPI1 651 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 CTSZQ9UBR2 303 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 MIOXQ9UGB7 285 aa21.07■□□□□ 0.96
NME3-202ENST00000561637 IGHV2-70DA0A0C4DH43 119 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 TCRBV3S1A0A5B6 114 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 C3orf80F5H4A9 247 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 E2F6O75461 281 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 GRPP07492 148 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 IRF2P14316 349 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 ZNF121P58317 390 aaPredicted RBP21.06■□□□□ 0.96
NME3-202ENST00000561637 UBA52P62987 128 aaKnown RBP21.06■□□□□ 0.96
NME3-202ENST00000561637 CBX1P83916 185 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 TUSC1Q2TAM9 212 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 KLHL12Q53G59 568 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 ZNF841Q6ZN19 808 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 MRI1Q9BV20 369 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 C1orf123Q9NWV4 160 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 MRPL15Q9P015 296 aaKnown RBP21.06■□□□□ 0.96
NME3-202ENST00000561637 NUP50Q9UKX7 468 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 POMPQ9Y244 141 aa21.06■□□□□ 0.96
NME3-202ENST00000561637 C22orf46C9J442 243 aa21.05■□□□□ 0.96
NME3-202ENST00000561637 PTBP3O95758 552 aaKnown RBP21.05■□□□□ 0.96
NME3-202ENST00000561637 OPRL1P41146 370 aa21.05■□□□□ 0.96
NME3-202ENST00000561637 NAA10P41227 235 aaPredicted RBP21.05■□□□□ 0.96
NME3-202ENST00000561637 GRB2P62993 217 aaKnown RBP21.05■□□□□ 0.96
NME3-202ENST00000561637 ELF3P78545 371 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms