RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CHRNA9Q9UGM1 479 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TBK1Q9UHD2 729 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TAC3Q9UHF0 121 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 ZNF221Q9UK13 617 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TP53TG3Q9ULZ0 132 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 COPS3Q9UNS2 423 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 MAB21L2Q9Y586 359 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 TCHHQ07283 1943 aa2.76□□□□□ -1.97
HERC1-215ENST00000561436 LRRK1Q38SD2 2015 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 ZNF638Q14966 1978 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 IGHV7-81A0A0B4J1V7 117 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 TRBV11-1A0A0K0K1C0 115 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 LOC100131303A0A0U1RQF7 123 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 E5RI56 91 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 GOLGA8TH3BQL2 631 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SULT2B1O00204 365 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 TP53I11O14683 189 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 HAT1O14929 419 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 CHST10O43529 356 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 CD5LO43866 347 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 TSC22D2O75157 780 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 ZNF254O75437 659 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 LYPLA1O75608 230 aaPredicted RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 RCBTB2O95199 551 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 LALBAP00709 142 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 IGKV3-15P01624 115 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 C1QAP02745 245 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 HPNP05981 417 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 RHOXF2BP0C7M4 288 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 PSMB1P20618 241 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 IMPDH1P20839 514 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 UQCRC2P22695 453 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 PAX7P23759 505 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SERPINB1P30740 379 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 DEKP35659 375 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 TMED10P49755 219 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 IGLV3-21P80748 117 aaPredicted RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 SARNPP82979 210 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 FGL1Q08830 312 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 RCAN2Q14206 197 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 PRR4Q16378 134 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 BCL2A1Q16548 175 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 KLHL38Q2WGJ6 581 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 ZNF791Q3KP31 576 aaPredicted RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 OR2B11Q5JQS5 317 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 CDKL4Q5MAI5 379 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 FAM120AOSQ5T036 256 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SPATA46Q5T0L3 261 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 DUPD1Q68J44 220 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 OR2A2Q6IF42 318 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 CCDC137Q6PK04 289 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 CYHR1Q6ZMK1 362 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SYCE1Q8N0S2 351 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 C2orf73Q8N5S3 287 aaPredicted RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 UBL4BQ8N7F7 174 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 OR51G2Q8NGK0 314 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 OR52M1Q8NGK5 317 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 NRGNQ92686 78 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 MAGEB18Q96M61 343 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 NAP1L5Q96NT1 182 aaPredicted RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 PRAP1Q96NZ9 151 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 CCL19Q99731 98 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 NRTNQ99748 197 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SLC35A5Q9BS91 424 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 HES7Q9BYE0 225 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 DEFB127Q9H1M4 99 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 Q9H3A6 140 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 EHD1Q9H4M9 534 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 IKZF5Q9H5V7 419 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 EXO5Q9H790 373 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 PTGES2Q9H7Z7 377 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 NHEJ1Q9H9Q4 299 aaPredicted RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 PARVBQ9HBI1 364 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 LRTM1Q9HBL6 345 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 LYRM4Q9HD34 91 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SLC17A5Q9NRA2 495 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 TNFRSF19Q9NS68 423 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 MS4A12Q9NXJ0 267 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 VNN3Q9NY84 501 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 PIPOXQ9P0Z9 390 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 EXTL2Q9UBQ6 330 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 DCDC2Q9UHG0 476 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 RIMS3Q9UJD0 308 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 RASD1Q9Y272 281 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 SDK2Q58EX2 2172 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 TMEM131Q92545 1883 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 NBPF19A0A087WUL8 3843 aa2.75□□□□□ -1.97
HERC1-215ENST00000561436 MYO18AQ92614 2054 aaKnown RBP2.75□□□□□ -1.97
HERC1-215ENST00000561436 PCNX1Q96RV3 2341 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 RP1L1Q8IWN7 2480 aaPredicted RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 MYOFQ9NZM1 2061 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 FAM168BA1KXE4 195 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 IQCF5A8MTL0 148 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 GOLGA6L19H0YKK7 550 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 EFNA2O43921 213 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 RDH16O75452 317 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 SRSF10O75494 262 aaKnown RBP2.74□□□□□ -1.97
HERC1-215ENST00000561436 OR2J2O76002 312 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 MYO1DO94832 1006 aa2.74□□□□□ -1.97
HERC1-215ENST00000561436 CA1P00915 261 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms