RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 AASSQ9UDR5 926 aa8.58□□□□□ -1.04
HERC1-212ENST00000561348 KCNS2Q9ULS6 477 aa8.58□□□□□ -1.04
HERC1-212ENST00000561348 WIPI2Q9Y4P8 454 aa8.58□□□□□ -1.04
HERC1-212ENST00000561348 LRP12Q9Y561 859 aa8.58□□□□□ -1.04
HERC1-212ENST00000561348 GMPPBQ9Y5P6 360 aa8.58□□□□□ -1.04
HERC1-212ENST00000561348 DYSFO75923 2080 aa8.58□□□□□ -1.04
HERC1-212ENST00000561348 ZANQ9Y493 2812 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 TMEM269A0A1B0GVZ9 245 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 A6NLC8 198 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 ANKRD30BLA7E2S9 258 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 IQCF6A8MYZ5 107 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 ZNF670-ZNF695F2Z2N8 137 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 H3BSH0 61 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 MLNRO43193 412 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 XRCC2O43543 280 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 LMX1BO60663 402 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 RP2O75695 350 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 CYB5R3P00387 301 aaPredicted RBP8.57□□□□□ -1.04
HERC1-212ENST00000561348 ALOX5APP20292 161 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 RIDAP52758 137 aaKnown RBP8.57□□□□□ -1.04
HERC1-212ENST00000561348 RIPPLY3P57055 190 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 KRTAP1-1Q07627 177 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 SLC3A1Q07837 685 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 RCN1Q15293 331 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 ODF4Q2M2E3 257 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 KRTAP27-1Q3LI81 207 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 C6orf52Q5T4I8 152 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 NXNL2Q5VZ03 156 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 COLCA1Q6ZS62 124 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 KCTD8Q6ZWB6 473 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 RFLNBQ8N5W9 214 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 YIPF7Q8N8F6 280 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 C19orf18Q8NEA5 215 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 OR8J1Q8NGP2 316 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 SGK3Q96BR1 496 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 MEGF10Q96KG7 1140 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 SLC29A1Q99808 456 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 APOL4Q9BPW4 351 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 BEX2Q9BXY8 128 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 GABARAPL3Q9BY60 117 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 TMEM106BQ9NUM4 274 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 IL19Q9UHD0 177 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 COPS3Q9UNS2 423 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 TMEM14AQ9Y6G1 99 aa8.57□□□□□ -1.04
HERC1-212ENST00000561348 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.56□□□□□ -1.04
HERC1-212ENST00000561348 hCG_1807616A0A1W2PRN6 198 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 OTX1P32242 354 aaPredicted RBP8.56□□□□□ -1.04
HERC1-212ENST00000561348 GNALP38405 381 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 GMFBP60983 142 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 MRPS11P82912 194 aaKnown RBP8.56□□□□□ -1.04
HERC1-212ENST00000561348 AADACL4Q5VUY2 407 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 LPCAT4Q643R3 524 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 ZNF322Q6U7Q0 402 aaPredicted RBP8.56□□□□□ -1.04
HERC1-212ENST00000561348 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 ZNF555Q8NEP9 628 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 DEFB108BQ8NET1 73 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 OR52H1Q8NGJ2 320 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 OR11L1Q8NGX0 322 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 PIGCQ92535 297 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 RFKQ969G6 155 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 PPP1R14AQ96A00 147 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 FAM71F1Q96KD3 344 aaPredicted RBP8.56□□□□□ -1.04
HERC1-212ENST00000561348 MBOAT4Q96T53 435 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 SLC30A2Q9BRI3 323 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 PAPOLGQ9BWT3 736 aaKnown RBP8.56□□□□□ -1.04
HERC1-212ENST00000561348 SHARPINQ9H0F6 387 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 ADGRL4Q9HBW9 690 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 ZNF319Q9P2F9 582 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 C2CD3Q4AC94 2353 aa8.56□□□□□ -1.04
HERC1-212ENST00000561348 YLPM1P49750 1951 aaKnown RBP8.55□□□□□ -1.04
HERC1-212ENST00000561348 LRRC30A6NM36 301 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 FAM157AC9JC47 383 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 LOC110117498-PIK3R3F6TDL0 507 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 ENTPD6O75354 484 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 KRT8P05787 483 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 CD55P08174 381 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 TACSTD2P09758 323 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 ANPEPP15144 967 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 HTR1FP30939 366 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 GSK3AP49840 483 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
HERC1-212ENST00000561348 FAM3AP98173 230 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 MPPED2Q15777 294 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 ZNF829Q3KNS6 432 aaPredicted RBP8.55□□□□□ -1.04
HERC1-212ENST00000561348 CHRFAM7AQ494W8 412 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 DMRTC1Q5HYR2 192 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 FAM201AQ5SY85 155 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 FAHD2BQ6P2I3 314 aaPredicted RBP8.55□□□□□ -1.04
HERC1-212ENST00000561348 THAP5Q7Z6K1 395 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 ZNF679Q8IYX0 411 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 KLHL36Q8N4N3 616 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 OR8B12Q8NGG6 310 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 CYGBQ8WWM9 190 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 ASB17Q8WXJ9 295 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 RNF166Q96A37 237 aaPredicted RBP8.55□□□□□ -1.04
HERC1-212ENST00000561348 RAB39BQ96DA2 213 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 RNFT2Q96EX2 444 aa8.55□□□□□ -1.04
HERC1-212ENST00000561348 FAHD2AQ96GK7 314 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms