RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GRB2P62993 217 aaKnown RBP14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 CBX1P83916 185 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 GINS1Q14691 196 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 PLBD1Q6P4A8 553 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 Q8TCH9 128 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZMYND19Q96E35 227 aaPredicted RBP14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 ABHD6Q9BV23 337 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 SUCNR1Q9BXA5 334 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 POMPQ9Y244 141 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 PPIAL4AQ9Y536 164 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 AUP1Q9Y679 476 aa14.39□□□□□ -0.11
CDC42BPB-208ENST00000561271 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 HAX1O00165 279 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 XRCC2O43543 280 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 SELENOFO60613 162 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 PRKACGP22612 351 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 SLC15A1P46059 708 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 GNB2P62879 340 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 TIGD6Q17RP2 521 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 USP43Q70EL4 1123 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 TIGD4Q8IY51 512 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 RNF133Q8WVZ7 376 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 NEIL1Q96FI4 390 aaPredicted RBP14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 MRI1Q9BV20 369 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 SLC22A4Q9H015 551 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 MARCH7Q9H992 704 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 FN3KRPQ9HA64 309 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZNF556Q9HAH1 456 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 MRPL15Q9P015 296 aaKnown RBP14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 MIOXQ9UGB7 285 aa14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 NOP16Q9Y3C1 178 aaKnown RBP14.38□□□□□ -0.11
CDC42BPB-208ENST00000561271 NBEAL1Q6ZS30 2694 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 PRR23D1E9PI22 279 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 OSMP13725 252 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 CD80P33681 288 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 PITPNBP48739 271 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZNF121P58317 390 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 ACTG1P63261 375 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 GFOD2Q3B7J2 385 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 KLHL12Q53G59 568 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 KLF17Q5JT82 389 aaPredicted RBP14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 LYPD2Q6UXB3 125 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 FAM57BQ71RH2 274 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 NLRC3Q7RTR2 1065 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 SLC16A9Q7RTY1 509 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 BOLLQ8N9W6 283 aaKnown RBP14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 BBS1Q8NFJ9 593 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 OR8B3Q8NGG8 313 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZFAND2BQ8WV99 257 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 ERGIC1Q969X5 290 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 SPSB4Q96A44 273 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 REEP6Q96HR9 211 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 OR8B2Q96RD0 313 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 TOR3AQ9H497 397 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 OPA3Q9H6K4 179 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 BRD7Q9NPI1 651 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 ESM1Q9NQ30 184 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 DNAJB9Q9UBS3 223 aa14.37□□□□□ -0.11
CDC42BPB-208ENST00000561271 IGHV2-70DA0A0C4DH43 119 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 A6NLC8 198 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 GMDSO60547 372 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 FSTL3O95633 263 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 PTBP3O95758 552 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 HOXB6P17509 224 aaKnown RBP14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 OPRL1P41146 370 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 NAA10P41227 235 aaPredicted RBP14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 PAX2Q02962 417 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 TMEM236Q5W0B7 351 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 DCDC5Q6ZRR9 648 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZNF826PQ6ZT77 177 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 PRSS45Q7RTY3 260 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 CPOQ8IVL8 374 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 PLEKHA8Q96JA3 519 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 JMJD8Q96S16 334 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 MMADHCQ9H3L0 296 aaPredicted RBP14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 YY1AP1Q9H869 796 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 KIF17Q9P2E2 1029 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 RNF7Q9UBF6 113 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZNF69Q9UC07 566 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 KLHDC2Q9Y2U9 406 aa14.36□□□□□ -0.11
CDC42BPB-208ENST00000561271 hCG_38984A0A1B0GV85 526 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 TRIM77I1YAP6 450 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 PRODHO43272 600 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 TIPRLO75663 272 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 GRPP07492 148 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 ANXA8P13928 327 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 FAM3AP98173 230 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 CDK5Q00535 292 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 SFRP4Q6FHJ7 346 aaPredicted RBP14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 SHFQ7M4L6 423 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 PAPD5Q8NDF8 572 aaKnown RBP14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 DACT3Q96B18 629 aaPredicted RBP14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 CADM1Q9BY67 442 aaKnown RBP14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 SLC25A19Q9HC21 320 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 C1orf123Q9NWV4 160 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 ZNF319Q9P2F9 582 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 CTSZQ9UBR2 303 aa14.35□□□□□ -0.11
CDC42BPB-208ENST00000561271 CLN8Q9UBY8 286 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms