RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 KIAA1456Q9P272 454 aa2.9□□□□□ -1.95
HERC1-211ENST00000560983 ONECUT1Q9UBC0 465 aa2.9□□□□□ -1.95
HERC1-211ENST00000560983 EIF3KQ9UBQ5 218 aaKnown RBP2.9□□□□□ -1.95
HERC1-211ENST00000560983 TCF19Q9Y242 345 aa2.9□□□□□ -1.95
HERC1-211ENST00000560983 VPS13BQ7Z7G8 4022 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IGLV5-52A0A0A0MRZ9 124 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IGHV4-28A0A0C4DH34 117 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IQCMA0A1B0GVH7 501 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 A0A1B0GWJ7 208 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 CCDC189A1A4V9 331 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 LRRC30A6NM36 301 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 STX16-NPEPL1H3BU86 382 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 CCL24O00175 119 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 STX16O14662 325 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 MLNRO43193 412 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 ADAM20O43506 726 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 STX11O75558 287 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 CRCPO75575 148 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 KRT6AP02538 564 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 KRT6BP04259 564 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IFNA6P05013 189 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 C2P06681 752 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 RPS17P08708 135 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 DUX4L4P0CJ87 422 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IGHV4-30-4P0DP06 118 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 HOXB9P17482 250 aaPredicted RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 CRABP2P29373 138 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 APLNRP35414 380 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 HSD17B3P37058 310 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 RPS5P46782 204 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 KRT6CP48668 564 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 ELF3P78545 371 aaPredicted RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 C2orf54Q08AI8 447 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 ILF2Q12905 390 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 EPS8Q12929 822 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 MAB21L1Q13394 359 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 SELPLGQ14242 412 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 FASTKD3Q14CZ7 662 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 SLC36A2Q495M3 483 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 ARL9Q6T311 187 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 SLC16A14Q7RTX9 510 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 DPPA2Q7Z7J5 298 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 ZER1Q7Z7L7 766 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 ZDHHC23Q8IYP9 409 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 C1orf87Q8N0U7 546 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 C10orf111Q8N326 155 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 OR2C3Q8N628 320 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 TEX45Q8NA69 505 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 RBM15BQ8NDT2 890 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 SLC26A10Q8NG04 563 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 OR10AD1Q8NGE0 317 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 OR6N1Q8NGY5 312 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 FAM76AQ8TAV0 307 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 TAAR8Q969N4 342 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 HAVCR1Q96D42 359 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 C4orf45Q96LM5 186 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IQCGQ9H095 443 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 CCDC134Q9H6E4 229 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 REEP4Q9H6H4 257 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 B3GAT2Q9NPZ5 323 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 SCRT2Q9NQ03 307 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 VNN3Q9NY84 501 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 CPSF2Q9P2I0 782 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 GLS2Q9UI32 602 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 FAF1Q9UNN5 650 aaPredicted RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 SRRM2Q9UQ35 2752 aaKnown RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 POLR3HQ9Y535 204 aaPredicted RBP2.89□□□□□ -1.95
HERC1-211ENST00000560983 LYVE1Q9Y5Y7 322 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 CAPN7Q9Y6W3 813 aa2.89□□□□□ -1.95
HERC1-211ENST00000560983 IGLV1-36A0A0B4J1U3 117 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 ELOVL7A1L3X0 281 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 CFAP73A6NFT4 308 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SAC3D1A6NKF1 404 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 ZNF726A6NNF4 738 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 F5H5P2 479 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 LGALS8O00214 317 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 BMPR1BO00238 502 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 NDUFA2O43678 99 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 RHBDL1O75783 438 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 CDK2AP2O75956 126 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 KLHL2O95198 593 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 BRI3O95415 125 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 GYPAP02724 150 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 ALDOBP05062 364 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SERPINE1P05121 402 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 GKN3PP0CG01 181 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 RBMY1A1P0DJD3 496 aaKnown RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 GP9P14770 177 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SPNP16150 400 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 NCF2P19878 526 aaPredicted RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 PRPH2P23942 346 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 FASP25445 335 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SLC6A1P30531 599 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 GRPRP30550 384 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 SRP9P49458 86 aaKnown RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 GDI2P50395 445 aaKnown RBP2.88□□□□□ -1.95
HERC1-211ENST00000560983 RAD23AP54725 363 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 RAB25P57735 213 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 PSG4Q00888 419 aa2.88□□□□□ -1.95
HERC1-211ENST00000560983 FUT5Q11128 374 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms