RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ING5Q8WYH8 240 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 FAM122AQ96E09 287 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 MYEOVQ96EZ4 313 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 S100A13Q99584 98 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CCDC3Q9BQI4 270 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF649Q9BS31 505 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 SNHG12Q9BXW3 62 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 DDIT4Q9NX09 232 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 RNF186Q9NXI6 227 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 MOKQ9UQ07 419 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 A0A1W2PPV4 95 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 C7orf77A4D0Y5 90 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 RNF222A6NCQ9 220 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2AT4A6NND4 320 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 VWC2LB2RUY7 222 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 FAAHO00519 579 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 FFAR1O14842 300 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 HSPA12AO43301 675 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 SOX15O60248 233 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR10H3O60404 316 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CD5P06127 495 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 TDGF1P3P51864 188 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 PSG6Q00889 435 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 INSM1Q01101 510 aaPredicted RBP5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 PMPCAQ10713 525 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ENPP2Q13822 863 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 MAPK14Q16539 360 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ACTBL2Q562R1 376 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 HIST2H3PS2Q5TEC6 136 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 GPR157Q5UAW9 335 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 ARMC6Q6NXE6 501 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 C1orf94Q6P1W5 598 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 LANCL3Q6ZV70 420 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 LINGO2Q7L985 606 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 C5orf24Q7Z6I8 188 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CLECL1Q8IZS7 167 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 SIDT2Q8NBJ9 832 aaKnown RBP5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR4K2Q8NGD2 314 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR4D9Q8NGE8 314 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR56A1Q8NGH5 318 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR5D16Q8NGK9 328 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 OR1L4Q8NGR5 311 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 NUDCD2Q8WVJ2 157 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 C22orf15Q8WYQ4 148 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 IMP4Q96G21 291 aaKnown RBP5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 AJUBAQ96IF1 538 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 LRRC3BQ96PB8 259 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 NMNAT2Q9BZQ4 307 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 RDH14Q9HBH5 336 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 SGK2Q9HBY8 427 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 CALML5Q9NZT1 146 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 B9D1Q9UPM9 204 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 LRP12Q9Y561 859 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 KPTNQ9Y664 436 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 PLXNA3P51805 1871 aa5.97□□□□□ -1.45
TSPAN3-209ENST00000560715 IGLV3-25P01717 112 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 IFNW1P05000 195 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 ELANEP08246 267 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 HKR1P10072 659 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 FGF7P21781 194 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 UBE2MP61081 183 aaKnown RBP5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 STXBP1P61764 594 aaKnown RBP5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 EIF4EBP2Q13542 120 aaPredicted RBP5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 ISXQ2M1V0 245 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF791Q3KP31 576 aaPredicted RBP5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 KHDC3LQ587J8 217 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 SIRPB2Q5JXA9 342 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2A2Q6IF42 318 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 C11orf87Q6NUJ2 197 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF322Q6U7Q0 402 aaPredicted RBP5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 KIRREL2Q6UWL6 708 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 GDF7Q7Z4P5 450 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 MEX3DQ86XN8 651 aaKnown RBP5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 BEST3Q8N1M1 668 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 HIST3H2BBQ8N257 126 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF611Q8N823 705 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 SLC30A7Q8NEW0 376 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 OR8J2Q8NGG1 315 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 OR10R2Q8NGX6 335 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 NUBPLQ8TB37 319 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 GPX8Q8TED1 209 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 RAB1CQ92928 201 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 LHX4Q969G2 390 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 ZBTB8AQ96BR9 441 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 CMTM7Q96FZ5 175 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 C7orf69Q9H7B7 122 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 PPIL1Q9Y3C6 166 aa5.96□□□□□ -1.45
TSPAN3-209ENST00000560715 OR5H15A6NDH6 313 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 OR5H14A6NHG9 310 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 OR5H1A6NKK0 313 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 FAM157AC9JC47 383 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 M0R143 59 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 PPP1R2P9O14990 202 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 NARSO43776 548 aaKnown RBP5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 DUX1O43812 170 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 FAM157CP0CG43 387 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 PRSS56P0CW18 603 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 ATF1P18846 271 aa5.96□□□□□ -1.46
TSPAN3-209ENST00000560715 ELAVL4P26378 380 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms