RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 STOMP27105 288 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 CX3CR1P49238 355 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 PRKXP51817 358 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 PSMA6P60900 246 aaKnown RBP10.2□□□□□ -0.78
LDLR-212ENST00000560467 MALLQ13021 153 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 CDK5R1Q15078 307 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 TSC22D1Q15714 1073 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 TBC1D28Q2M2D7 210 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 YIF1BQ5BJH7 314 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 TIMM23BQ5SRD1 257 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 ZNF684Q5T5D7 378 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 TMEM244Q5VVB8 128 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 ZNF774Q6NX45 483 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 FDX2Q6P4F2 183 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 RFLNBQ8N5W9 214 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 IL17RDQ8NFM7 739 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 OR5L1Q8NGL2 311 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 OR2G2Q8NGZ5 317 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 AKR7LQ8NHP1 331 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 GPR148Q8TDV2 347 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 S100PBPQ96BU1 408 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 BOD1Q96IK1 185 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 AMELYQ99218 206 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 TMED9Q9BVK6 235 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 SLITRK2Q9H156 845 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 OR10A4Q9H209 315 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 CDH20Q9HBT6 801 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 BRD7Q9NPI1 651 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 SLC17A5Q9NRA2 495 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 OR52A1Q9UKL2 312 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 STUB1Q9UNE7 303 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 ZNF281Q9Y2X9 895 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 RNF115Q9Y4L5 304 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 SPEF1Q9Y4P9 236 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 CUBNO60494 3623 aa10.2□□□□□ -0.78
LDLR-212ENST00000560467 A0A1B0GVI7 797 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 H3BSA7 217 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 M0R135 149 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CD5LO43866 347 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 NDUFS7O75251 213 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 MTRF1O75570 445 aaKnown RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 GATBO75879 557 aaKnown RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 ARL6IP5O75915 188 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 RGS9O75916 674 aaPredicted RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 IGHV4-39P01824 125 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 LCATP04180 440 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 SERPINA5P05154 406 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 ADRA2AP08913 450 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 PATE4P0C8F1 98 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CBR1P16152 277 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CCNOP22674 350 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CFL1P23528 166 aaKnown RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 LIPAP38571 399 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 GTF2A1P52655 376 aaPredicted RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 CCDC92Q53HC0 331 aaPredicted RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 DMKNQ6E0U4 476 aaPredicted RBP10.19□□□□□ -0.78
LDLR-212ENST00000560467 ANKRD13BQ86YJ7 626 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 ZFP41Q8N8Y5 198 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 ZNF485Q8NCK3 441 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CCDC54Q8NEL0 328 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 KBTBD8Q8NFY9 601 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 PHYHIPQ92561 330 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 TMEM203Q969S6 136 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 YIPF6Q96EC8 236 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 ZNF799Q96GE5 643 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 DOK1Q99704 481 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CHCHD6Q9BRQ6 235 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CKLFQ9UBR5 152 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 ZNF391Q9UJN7 358 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 GRIP1Q9Y3R0 1128 aa10.19□□□□□ -0.78
LDLR-212ENST00000560467 CHD3Q12873 2000 aaKnown RBP10.18□□□□□ -0.78
LDLR-212ENST00000560467 C5orf49A4QMS7 147 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 A6NHS1 94 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 ZNF879B4DU55 563 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 E9PI62 339 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 SLC22A1O15245 554 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 TBX1O43435 398 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 SYNGR3O43761 229 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 IFNA2P01563 188 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 MMP7P09237 267 aaPredicted RBP10.18□□□□□ -0.78
LDLR-212ENST00000560467 DANCRP0C864 163 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 RANBP1P43487 201 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 ZNF121P58317 390 aaPredicted RBP10.18□□□□□ -0.78
LDLR-212ENST00000560467 ADAM5Q6NVV9 412 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 FAM57BQ71RH2 274 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 CEACAM19Q7Z692 300 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 MDP1Q86V88 176 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 CATSPERDQ86XM0 798 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 C1orf174Q8IYL3 243 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 FAM169BQ8N8A8 192 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 SLC30A7Q8NEW0 376 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 ABHD4Q8TB40 342 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 TSEN15Q8WW01 171 aaKnown RBP10.18□□□□□ -0.78
LDLR-212ENST00000560467 ITFG2Q969R8 447 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 FBXW5Q969U6 566 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 TRMT61AQ96FX7 289 aaKnown RBP10.18□□□□□ -0.78
LDLR-212ENST00000560467 C4orf45Q96LM5 186 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 KCTD7Q96MP8 289 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 PBOV1Q9GZY1 135 aa10.18□□□□□ -0.78
LDLR-212ENST00000560467 WNT5BQ9H1J7 359 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms