RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 KLHL36Q8N4N3 616 aa12.35□□□□□ -0.43
IDH3A-219ENST00000560414 ZMYND19Q96E35 227 aaPredicted RBP12.35□□□□□ -0.43
IDH3A-219ENST00000560414 INTS14Q96SY0 518 aa12.35□□□□□ -0.43
IDH3A-219ENST00000560414 AMELYQ99218 206 aa12.35□□□□□ -0.43
IDH3A-219ENST00000560414 PATZ1Q9HBE1 687 aaKnown RBP12.35□□□□□ -0.43
IDH3A-219ENST00000560414 STAB1Q9NY15 2570 aa12.35□□□□□ -0.43
IDH3A-219ENST00000560414 A0A0G2JMP0 313 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 A0A0X1KG70 313 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 GGT3PA6NGU5 568 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 ZNF878C9JN71 531 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 PRR23D1E9PI22 279 aaPredicted RBP12.34□□□□□ -0.43
IDH3A-219ENST00000560414 EIF4EBP3O60516 100 aaPredicted RBP12.34□□□□□ -0.43
IDH3A-219ENST00000560414 GLCEO94923 617 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 PRR23D2P0DMB1 279 aaPredicted RBP12.34□□□□□ -0.43
IDH3A-219ENST00000560414 ANXA8P13928 327 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 ADRA2CP18825 462 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 CA6P23280 308 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 CDK5Q00535 292 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 TMEM155Q4W5P6 130 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 PRAMEF6Q5VXH4 476 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 CPOQ8IVL8 374 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 TIGD4Q8IY51 512 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 SPICQ8N5J4 248 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 RFLNBQ8N5W9 214 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 OR4M2Q8NGB6 313 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 DVL3Q92997 716 aaPredicted RBP12.34□□□□□ -0.43
IDH3A-219ENST00000560414 ABHD6Q9BV23 337 aa12.34□□□□□ -0.43
IDH3A-219ENST00000560414 CEACAM18A8MTB9 384 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 TBX1O43435 398 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 TCF21O43680 179 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 SELENOFO60613 162 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 HMGN1P05114 100 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 ANXA2P07355 339 aaKnown RBP12.33□□□□□ -0.44
IDH3A-219ENST00000560414 PAICSP22234 425 aaKnown RBP12.33□□□□□ -0.44
IDH3A-219ENST00000560414 MDH2P40926 338 aaKnown RBP12.33□□□□□ -0.44
IDH3A-219ENST00000560414 CX3CR1P49238 355 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 HOXA4Q00056 320 aaPredicted RBP12.33□□□□□ -0.44
IDH3A-219ENST00000560414 OR8G1Q15617 311 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 MPPED2Q15777 294 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 KLHL12Q53G59 568 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 LIPNQ5VXI9 398 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 BBS1Q8NFJ9 593 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 C19orf24Q9BVV8 132 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 C7orf69Q9H7B7 122 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 MARCH7Q9H992 704 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 TMEM165Q9HC07 324 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 MMP26Q9NRE1 261 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 UFSP2Q9NUQ7 469 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 DNAJC27Q9NZQ0 273 aa12.33□□□□□ -0.44
IDH3A-219ENST00000560414 F5H0A9 414 aaPredicted RBP12.32□□□□□ -0.44
IDH3A-219ENST00000560414 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 IFNL4K9M1U5 179 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 FOXH1O75593 365 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 HSD11B1P28845 292 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 CD200P41217 278 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 SLC15A1P46059 708 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 DAPP51397 102 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 GRB2P62993 217 aaKnown RBP12.32□□□□□ -0.44
IDH3A-219ENST00000560414 SHFQ7M4L6 423 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 C19orf18Q8NEA5 215 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 OR56B2PQ8NGI1 322 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 RNF133Q8WVZ7 376 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 UTP4Q969X6 686 aaKnown RBP12.32□□□□□ -0.44
IDH3A-219ENST00000560414 ADAT1Q9BUB4 502 aaKnown RBP12.32□□□□□ -0.44
IDH3A-219ENST00000560414 TVP23BQ9NYZ1 205 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 OPN4Q9UHM6 478 aa12.32□□□□□ -0.44
IDH3A-219ENST00000560414 LRRC30A6NM36 301 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 J3QLI3 93 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 FAM20BO75063 409 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 WNT2P09544 360 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 OPRL1P41146 370 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 NAA10P41227 235 aaPredicted RBP12.31□□□□□ -0.44
IDH3A-219ENST00000560414 GATA4P43694 442 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 CRISP1P54107 249 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 RAD23AP54725 363 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF121P58317 390 aaPredicted RBP12.31□□□□□ -0.44
IDH3A-219ENST00000560414 RPS7P62081 194 aaKnown RBP12.31□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF181Q2M3W8 571 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 FAM57BQ71RH2 274 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 PRSS45Q7RTY3 260 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 MUC20Q8N307 709 aaPredicted RBP12.31□□□□□ -0.44
IDH3A-219ENST00000560414 CELF2-AS1Q8N7Q2 184 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 THEM6Q8WUY1 208 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 SGK3Q96BR1 496 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 NRBF2Q96F24 287 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 PLEKHA8Q96JA3 519 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 TMEM246Q9BRR3 403 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 TOR3AQ9H497 397 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 SLC25A19Q9HC21 320 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 PAPOLBQ9NRJ5 636 aaKnown RBP12.31□□□□□ -0.44
IDH3A-219ENST00000560414 KIF17Q9P2E2 1029 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 ZNF319Q9P2F9 582 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 KLHDC2Q9Y2U9 406 aa12.31□□□□□ -0.44
IDH3A-219ENST00000560414 PPIAL4EA0A075B759 164 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 PPIAL4DF5H284 164 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 XRCC2O43543 280 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 MITFO75030 526 aaPredicted RBP12.3□□□□□ -0.44
IDH3A-219ENST00000560414 VENTXO95231 258 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 H2BFMP0C1H6 154 aa12.3□□□□□ -0.44
IDH3A-219ENST00000560414 PPIAL4FP0DN26 164 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms