RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 DPY19L4Q7Z388 723 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 IQCF1Q8N6M8 205 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 ZDHHC22Q8N966 263 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 SPERTQ8NA61 448 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 PLPP7Q8NBV4 271 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 OR8B3Q8NGG8 313 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 OR8B2Q96RD0 313 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 ADAT1Q9BUB4 502 aaKnown RBP17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 MARCH7Q9H992 704 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 FN3KRPQ9HA64 309 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 NTN4Q9HB63 628 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 ESM1Q9NQ30 184 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 UFSP2Q9NUQ7 469 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 NBEAL1Q6ZS30 2694 aa17.1■□□□□ 0.33
CHRNA3-207ENST00000559941 TMEM89A2RUT3 159 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 GNGT2O14610 69 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 GLCEO94923 617 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 ACTG1P63261 375 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 DCDC5Q6ZRR9 648 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 SPATC1Q76KD6 591 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 NLRC3Q7RTR2 1065 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 TRPM8Q7Z2W7 1104 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 ERI1Q8IV48 349 aaKnown RBP17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 OR56B2PQ8NGI1 322 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 OR6N2Q8NGY6 317 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 RNF133Q8WVZ7 376 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 SPSB4Q96A44 273 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 DACT3Q96B18 629 aaPredicted RBP17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 INTS14Q96SY0 518 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 ABHD6Q9BV23 337 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 PDP1Q9P0J1 537 aaPredicted RBP17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 RNF7Q9UBF6 113 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 N6AMT1Q9Y5N5 214 aa17.09■□□□□ 0.33
CHRNA3-207ENST00000559941 IGHV2-70DA0A0C4DH43 119 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 PPIAL4GP0DN37 164 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 GSTT1P30711 240 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 DDOSTP39656 456 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 PITPNBP48739 271 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 CX3CR1P49238 355 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 COMPP49747 757 aaPredicted RBP17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 DNAL1Q4LDG9 190 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 LYPD2Q6UXB3 125 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 BTNL3Q6UXE8 466 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 LRRN1Q6UXK5 716 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 RHOUQ7L0Q8 258 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 SHFQ7M4L6 423 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 TIGD4Q8IY51 512 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 RAB40AQ8WXH6 277 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 OTULINQ96BN8 352 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 SP140LQ9H930 580 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF69Q9UC07 566 aa17.08■□□□□ 0.32
CHRNA3-207ENST00000559941 APOC1P02654 83 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 PAICSP22234 425 aaKnown RBP17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 POU1F1P28069 291 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 HSD11B1P28845 292 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 GINS1Q14691 196 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 DOK3Q7L591 496 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 PRSS45Q7RTY3 260 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 C19orf18Q8NEA5 215 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 GCDHQ92947 438 aaPredicted RBP17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 OR51V1Q9H2C8 321 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 CLN8Q9UBY8 286 aa17.07■□□□□ 0.32
CHRNA3-207ENST00000559941 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 KIR2DS1A0A191URI9 304 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 PRR23D1E9PI22 279 aaPredicted RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 LGALS8O00214 317 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 PHYHO14832 338 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 GYG2O15488 501 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 TBX1O43435 398 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 ANXA2P07355 339 aaKnown RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 PRR23D2P0DMB1 279 aaPredicted RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 OSMP13725 252 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 PSMB10P40306 273 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 UBA52P62987 128 aaKnown RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 MZT1Q08AG7 82 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 FLOT2Q14254 428 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 WDR25Q64LD2 544 aaPredicted RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 RBMS3Q6XE24 437 aaKnown RBP17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 ZNF841Q6ZN19 808 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 SLC16A9Q7RTY1 509 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 SPATA24Q86W54 205 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 BCAS4Q8TDM0 211 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 SGK3Q96BR1 496 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 AMELYQ99218 206 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 FAM53CQ9NYF3 392 aa17.06■□□□□ 0.32
CHRNA3-207ENST00000559941 E2F6O75461 281 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 HMGN1P05114 100 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 ANXA8P13928 327 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 CFPP27918 469 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 OPRL1P41146 370 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 FAM3AP98173 230 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 HOXA4Q00056 320 aaPredicted RBP17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 CDK5Q00535 292 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 KCNJ8Q15842 424 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 TIGD6Q17RP2 521 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 HS3ST5Q8IZT8 346 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 BCL6BQ8N143 479 aaPredicted RBP17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 SIGLECL1Q8N7X8 197 aa17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 PAPD5Q8NDF8 572 aaKnown RBP17.05■□□□□ 0.32
CHRNA3-207ENST00000559941 OR52H1Q8NGJ2 320 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms