RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 KIAA2026Q5HYC2 2103 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 GPR137BO60478 399 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 CLPXO76031 633 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 GADD45GO95257 159 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 HLA-DQA2P01906 255 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 NOS3P29474 1203 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 GSSP48637 474 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 SMIM11AP58511 58 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 KRTAP10-3P60369 221 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 PSME3P61289 254 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 KRT72Q14CN4 511 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 OR8B8Q15620 311 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 GLYATQ6IB77 296 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 DRAM2Q6UX65 266 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 FAM90A1Q86YD7 464 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 GCSAMQ8N6F7 178 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 BOLLQ8N9W6 283 aaKnown RBP10.82□□□□□ -0.68
TPM1-220ENST00000559556 CCT8L2Q96SF2 557 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 OPA3Q9H6K4 179 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 KAAG1Q9UBP8 84 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 RNF114Q9Y508 228 aa10.82□□□□□ -0.68
TPM1-220ENST00000559556 CCDC22O60826 627 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 ECDO95905 644 aaPredicted RBP10.81□□□□□ -0.68
TPM1-220ENST00000559556 LHBP01229 141 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 IGHV4-59P01825 116 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 GYPAP02724 150 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 PSKH1P11801 424 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 RPS27P42677 84 aaKnown RBP10.81□□□□□ -0.68
TPM1-220ENST00000559556 IER3P46695 156 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 PROK1P58294 105 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 SPIBQ01892 262 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.81□□□□□ -0.68
TPM1-220ENST00000559556 GLYATL3Q5SZD4 288 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 TEX36Q5VZQ5 186 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 ASPHD2Q6ICH7 369 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 SPERTQ8NA61 448 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 LINC01006Q8NI28 216 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 LHX4Q969G2 390 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 RBM4BQ9BQ04 359 aaKnown RBP10.81□□□□□ -0.68
TPM1-220ENST00000559556 GORASP2Q9H8Y8 452 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 SPAG4Q9NPE6 437 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 C1orf123Q9NWV4 160 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 COMMD3-BMI1R4GMX3 469 aa10.81□□□□□ -0.68
TPM1-220ENST00000559556 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.8□□□□□ -0.68
TPM1-220ENST00000559556 A0A0U1RQK1 487 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 C5orf63A6NC05 138 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 GGT3PA6NGU5 568 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 BHLHE40O14503 412 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 DVL1O14640 695 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 OR10H3O60404 316 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 ZNF823P16415 610 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 MZT1Q08AG7 82 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 TSPAN31Q12999 210 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 METAP1DQ6UB28 335 aaPredicted RBP10.8□□□□□ -0.68
TPM1-220ENST00000559556 ZNF826PQ6ZT77 177 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 BTN2A1Q7KYR7 527 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 OR56B2PQ8NGI1 322 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 DDOQ99489 341 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 NSRP1Q9H0G5 558 aaKnown RBP10.8□□□□□ -0.68
TPM1-220ENST00000559556 RASSF4Q9H2L5 321 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 C14orf119Q9NWQ9 140 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 RPUSD1Q9UJJ7 312 aaKnown RBP10.8□□□□□ -0.68
TPM1-220ENST00000559556 KPTNQ9Y664 436 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 V9GYQ6 96 aa10.8□□□□□ -0.68
TPM1-220ENST00000559556 A0A1B0GVI7 797 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 hCG_1807616A0A1W2PRN6 198 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 A6NLC8 198 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 XRCC2O43543 280 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 GRPP07492 148 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 PYCR1P32322 319 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 IFNGR2P38484 337 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 ARF6P62330 175 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 TAF9Q16594 264 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 PCK2Q16822 640 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 CDONQ4KMG0 1287 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 SLC35F1Q5T1Q4 408 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 RPL13AP3Q6NVV1 102 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 LYPD4Q6UWN0 246 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 GDPGP1Q6ZNW5 385 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 DCXRQ7Z4W1 244 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 VMO1Q7Z5L0 202 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 ZDHHC21Q8IVQ6 265 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 PIP4P2Q8N4L2 257 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 ZSCAN4Q8NAM6 433 aaPredicted RBP10.79□□□□□ -0.68
TPM1-220ENST00000559556 CYB561A3Q8NBI2 242 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 SCCPDHQ8NBX0 429 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 PROKR2Q8NFJ6 384 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 OR4C15Q8NGM1 316 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 OR2T4Q8NH00 348 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 LRTOMTQ8WZ04 291 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 UBE2FQ969M7 185 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 SPSB4Q96A44 273 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 PYURFQ96I23 114 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 DMRTB1Q96MA1 342 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 COPS4Q9BT78 406 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 DPAGT1Q9H3H5 408 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 ZNRD1Q9P1U0 126 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 CD300AQ9UGN4 299 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 CDH10Q9Y6N8 788 aa10.79□□□□□ -0.68
TPM1-220ENST00000559556 IGHV3OR15-7A0A075B7D8 119 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms