RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 GPRIN2O60269 458 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 SRSF10O75494 262 aaKnown RBP7.93□□□□□ -1.14
LDLR-210ENST00000559340 MT-ND2P03891 347 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 CD1AP06126 327 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 KITLGP21583 273 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 PSMB10P40306 273 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 MZT1Q08AG7 82 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 ACSM1Q08AH1 577 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 GPR50Q13585 617 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 GK2Q14410 553 aaPredicted RBP7.93□□□□□ -1.14
LDLR-210ENST00000559340 IRF3Q14653 427 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 MED22Q15528 200 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 TBCEQ15813 527 aaPredicted RBP7.93□□□□□ -1.14
LDLR-210ENST00000559340 ADIPOQQ15848 244 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 GLYATL3Q5SZD4 288 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 ZBTB37Q5TC79 503 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 OR2G6Q5TZ20 316 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 DOK3Q7L591 496 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 ZNF367Q7RTV3 350 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 KLBQ86Z14 1044 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 ZNF676Q8N7Q3 588 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 OR8B12Q8NGG6 310 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 OR5AK2Q8NH90 309 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 LILRB1Q8NHL6 650 aaPredicted RBP7.93□□□□□ -1.14
LDLR-210ENST00000559340 THRSPQ92748 146 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 NEUROG1Q92886 237 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 DIRC2Q96SL1 478 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 RHNO1Q9BSD3 238 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 PLEKHF2Q9H8W4 249 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 ISG20L2Q9H9L3 353 aaKnown RBP7.93□□□□□ -1.14
LDLR-210ENST00000559340 ABCB9Q9NP78 766 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 DYNLRB1Q9NP97 96 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 G6PC2Q9NQR9 355 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 PURGQ9UJV8 347 aaKnown RBP7.93□□□□□ -1.14
LDLR-210ENST00000559340 HHLA2Q9UM44 414 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 SLC22A13Q9Y226 551 aa7.93□□□□□ -1.14
LDLR-210ENST00000559340 DYSFO75923 2080 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 IGLV3-9A0A075B6K5 115 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 DHRS7CA6NNS2 312 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 ANKRD30BLA7E2S9 258 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 CD300LBA8K4G0 201 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 IQCF6A8MYZ5 107 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 M0R233 179 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 SYT7O43581 403 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 PNPP00491 289 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 SERPINA3P01011 423 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 TTRP02766 147 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 ISG15P05161 165 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 ACHEP22303 614 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 TNFSF4P23510 183 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 DNASE1P24855 282 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 ZNF92Q03936 586 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 RIPPLY1Q0D2K3 151 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 PSG7Q13046 419 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 TRAM1Q15629 374 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 GFOD2Q3B7J2 385 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 SNAI3Q3KNW1 292 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 FAM209AQ5JX71 171 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 SPATA46Q5T0L3 261 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 DTX2Q86UW9 622 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 SPERTQ8NA61 448 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 SEMA6DQ8NFY4 1073 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 TSPAN14Q8NG11 270 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 OR13G1Q8NGZ3 307 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 OR51E1Q8TCB6 317 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 C10orf35Q96D05 121 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 TRMT61AQ96FX7 289 aaKnown RBP7.92□□□□□ -1.14
LDLR-210ENST00000559340 SYT3Q9BQG1 590 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 MRPL37Q9BZE1 423 aaKnown RBP7.92□□□□□ -1.14
LDLR-210ENST00000559340 RAB1BQ9H0U4 201 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 CXorf56Q9H5V9 222 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 ZNF696Q9H7X3 374 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 NEK6Q9HC98 313 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 GPR84Q9NQS5 396 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 TMEM100Q9NV29 134 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 PAK1IP1Q9NWT1 392 aaPredicted RBP7.92□□□□□ -1.14
LDLR-210ENST00000559340 TAAR3PQ9P1P4 343 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 ZDHHC8Q9ULC8 765 aa7.92□□□□□ -1.14
LDLR-210ENST00000559340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.91□□□□□ -1.14
LDLR-210ENST00000559340 MAGEA13PA6NCF6 341 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 TRIM64A6NGJ6 449 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 OR4C45A6NMZ5 311 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 P2RY10O00398 339 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 DHRS3O75911 302 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 RAF1P04049 648 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 CD2P06729 351 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 DANCRP0C864 163 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 CD53P19397 219 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 GNALP38405 381 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 GSK3AP49840 483 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 CDH15P55291 814 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 ERVS71-1P61550 626 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 FAM3AP98173 230 aa7.91□□□□□ -1.14
LDLR-210ENST00000559340 EMX1Q04741 257 aaPredicted RBP7.91□□□□□ -1.14
LDLR-210ENST00000559340 MFGE8Q08431 387 aaPredicted RBP7.91□□□□□ -1.14
LDLR-210ENST00000559340 MLLT11Q13015 90 aaPredicted RBP7.91□□□□□ -1.14
LDLR-210ENST00000559340 HLXQ14774 488 aaPredicted RBP7.91□□□□□ -1.14
LDLR-210ENST00000559340 CDK5R1Q15078 307 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms