RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SRP14P37108 136 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 GNALP38405 381 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 MDH2P40926 338 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 OPRL1P41146 370 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 NAA10P41227 235 aaPredicted RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 DVL1P1P54792 670 aaPredicted RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 ZNF121P58317 390 aaPredicted RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 BTG1P62324 171 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ZNF92Q03936 586 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 KRTAP1-1Q07627 177 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 POU4F2Q12837 409 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 APOFQ13790 326 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 KPNB1Q14974 876 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 OR8G1Q15617 311 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CR1LQ2VPA4 569 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 GFOD2Q3B7J2 385 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ZNF829Q3KNS6 432 aaPredicted RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 TMEM155Q4W5P6 130 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 C4orf48Q5BLP8 95 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 GLYATL3Q5SZD4 288 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 FAM120AOSQ5T036 256 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 AVPI1Q5T686 147 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 NXNL2Q5VZ03 156 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 DEGS2Q6QHC5 323 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 Q6ZR03 302 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 FAM57BQ71RH2 274 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 MEPCEQ7L2J0 689 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 NLRC3Q7RTR2 1065 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 SLC16A9Q7RTY1 509 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 COMMD2Q86X83 199 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 TCEANCQ8N8B7 351 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CSNK2A3Q8NEV1 391 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 OR4M2Q8NGB6 313 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 OR10S1Q8NGN2 331 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 OR8J1Q8NGP2 316 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 OR8S1Q8NH09 359 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 OR2AE1Q8NHA4 323 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 FAM81AQ8TBF8 368 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 TMEM163Q8TC26 289 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ITLN1Q8WWA0 313 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 TRUB1Q8WWH5 349 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 GTF3AQ92664 365 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 RFKQ969G6 155 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ITFG2Q969R8 447 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 C1orf159Q96HA4 380 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 REEP6Q96HR9 211 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 PGAM5Q96HS1 289 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 MEGF10Q96KG7 1140 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 HIST1H2AAQ96QV6 131 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 IL4I1Q96RQ9 567 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 MYCBPQ99417 103 aaPredicted RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 TEAD3Q99594 435 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CIB1Q99828 191 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ADAT1Q9BUB4 502 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 PAPOLGQ9BWT3 736 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 GABARAPL1Q9H0R8 117 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 POFUT1Q9H488 388 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 MARCH7Q9H992 704 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 FN3KRPQ9HA64 309 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 LPAR2Q9HBW0 351 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 GCM1Q9NP62 436 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 ABCB9Q9NP78 766 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 BRD7Q9NPI1 651 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 TRIM36Q9NQ86 728 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 C14orf119Q9NWQ9 140 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 IMPAD1Q9NX62 359 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 DNAJC27Q9NZQ0 273 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 CACNG2Q9Y698 323 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 FN1P02751 2386 aaKnown RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 NSD1Q96L73 2696 aaPredicted RBP3.7□□□□□ -1.82
SNX1-205ENST00000559339 ZANQ9Y493 2812 aa3.7□□□□□ -1.82
SNX1-205ENST00000559339 PPIAL4EA0A075B759 164 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 IGHV3-64DA0A0J9YX35 117 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 hCG_1807616A0A1W2PRN6 198 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ACOD1A6NK06 481 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 SAC3D1A6NKF1 404 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 A6NLC8 198 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ZNF670-ZNF695F2Z2N8 137 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 PPIAL4DF5H284 164 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 H0YL77 283 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 TMEM178BH3BS89 294 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 J3QLI3 93 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 WNT9BO14905 357 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 MPZL2O60487 215 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 MITFO75030 526 aaPredicted RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 FSTL3O95633 263 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 PNPP00491 289 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 IGHV2-5P01817 119 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 KRT8P05787 483 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 MRPL3P09001 348 aaKnown RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 OR2T7P0C7T2 308 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 PPIAL4FP0DN26 164 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 DCTDP32321 178 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 THBS2P35442 1172 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 GATA4P43694 442 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 GSK3AP49840 483 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 ALDH3A2P51648 485 aa3.69□□□□□ -1.82
SNX1-205ENST00000559339 RIDAP52758 137 aaKnown RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 PSMA6P60900 246 aaKnown RBP3.69□□□□□ -1.82
SNX1-205ENST00000559339 CXCR4P61073 352 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms