RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 UTP4Q969X6 686 aaKnown RBP10.13□□□□□ -0.79
TPM1-216ENST00000558910 TMEM186Q96B77 213 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 KCNJ15Q99712 375 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 ABHD6Q9BV23 337 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 TEX12Q9BXU0 123 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 KRT84Q9NSB2 600 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 CGGBP1Q9UFW8 167 aaPredicted RBP10.13□□□□□ -0.79
TPM1-216ENST00000558910 ATPIF1Q9UII2 106 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 KLHDC2Q9Y2U9 406 aa10.13□□□□□ -0.79
TPM1-216ENST00000558910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.12□□□□□ -0.79
TPM1-216ENST00000558910 ARRDC5A6NEK1 342 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 CD300LBA8K4G0 201 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 IQCF6A8MYZ5 107 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 ZNF878C9JN71 531 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 G3V2T6 193 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 IGHV2-5P01817 119 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 GRPP07492 148 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 CD55P08174 381 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 EPHA2P29317 976 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 SEC61A1P61619 476 aaKnown RBP10.12□□□□□ -0.79
TPM1-216ENST00000558910 CDK5Q00535 292 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 SLC3A1Q07837 685 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 GK3PQ14409 553 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 ZMYND11Q15326 602 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 ATP6AP1Q15904 470 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 TIGD6Q17RP2 521 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 KRTAP27-1Q3LI81 207 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 LRRN1Q6UXK5 716 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.12□□□□□ -0.79
TPM1-216ENST00000558910 OR56B2PQ8NGI1 322 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 ST7LQ8TDW4 575 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 RAB39BQ96DA2 213 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 PGAM5Q96HS1 289 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 SLC30A2Q9BRI3 323 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 RIBC2Q9H4K1 309 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 METTL17Q9H7H0 456 aaPredicted RBP10.12□□□□□ -0.79
TPM1-216ENST00000558910 GCM1Q9NP62 436 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 LPAR3Q9UBY5 353 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 IL19Q9UHD0 177 aa10.12□□□□□ -0.79
TPM1-216ENST00000558910 DYSFO75923 2080 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 LOC105371242A0A075B767 164 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 PHF1O43189 567 aaPredicted RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 PRKYO43930 277 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 RPLP1P05386 114 aaKnown RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 LYNP07948 512 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 ADH4P08319 380 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 TUBG1P23258 451 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 PMELP40967 661 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 SLC15A1P46059 708 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 SRP9P49458 86 aaKnown RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 DVL1P1P54792 670 aaPredicted RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 ZNF121P58317 390 aaPredicted RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 GMFBP60983 142 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 BTG1P62324 171 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 KPNB1Q14974 876 aaKnown RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 PTGES3Q15185 160 aaKnown RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 XP32Q5T750 250 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 DRAM2Q6UX65 266 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 COLCA1Q6ZS62 124 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 SHFQ7M4L6 423 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 TIGD4Q8IY51 512 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 Q8N3U1 123 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 TCEANCQ8N8B7 351 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 REEP6Q96HR9 211 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 IL4I1Q96RQ9 567 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 ADAT1Q9BUB4 502 aaKnown RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 PPP1R3EQ9H7J1 279 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 TUBG2Q9NRH3 451 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 DDX28Q9NUL7 540 aaKnown RBP10.11□□□□□ -0.79
TPM1-216ENST00000558910 LAMP5Q9UJQ1 280 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 GTF2A1LQ9UNN4 478 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 ARHGAP32A7KAX9 2087 aa10.11□□□□□ -0.79
TPM1-216ENST00000558910 hCG_1807616A0A1W2PRN6 198 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 A6NLC8 198 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 TMEM178BH3BS89 294 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 MAGEB4O15481 346 aaPredicted RBP10.1□□□□□ -0.79
TPM1-216ENST00000558910 ALX3O95076 343 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 APOL3O95236 402 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 IGHV2-70P01814 119 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 IRF2P14316 349 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 ZFP36P26651 326 aaKnown RBP10.1□□□□□ -0.79
TPM1-216ENST00000558910 CD80P33681 288 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 POLR2IP36954 125 aaKnown RBP10.1□□□□□ -0.79
TPM1-216ENST00000558910 BLVRAP53004 296 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 GRB2P62993 217 aaKnown RBP10.1□□□□□ -0.79
TPM1-216ENST00000558910 MAB21L1Q13394 359 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 MPPED2Q15777 294 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 DCAF12L2Q5VW00 463 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 SFRP4Q6FHJ7 346 aaPredicted RBP10.1□□□□□ -0.79
TPM1-216ENST00000558910 FAHD1Q6P587 224 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 ZNF826PQ6ZT77 177 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 KRT77Q7Z794 578 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 COMMD2Q86X83 199 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 ZDHHC13Q8IUH4 622 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 C1orf159Q96HA4 380 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 TBX5Q99593 518 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 SLC25A19Q9HC21 320 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 TMEM160Q9NX00 188 aa10.1□□□□□ -0.79
TPM1-216ENST00000558910 H2AFY2Q9P0M6 372 aaPredicted RBP10.1□□□□□ -0.79
TPM1-216ENST00000558910 ZNF319Q9P2F9 582 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms