RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 NKX1-2Q9UD57 310 aaPredicted RBP10.49□□□□□ -0.73
SMAD3-205ENST00000558428 TMEM269A0A1B0GVZ9 245 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 A0A1W2PQL4 384 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 H0YL77 283 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 MAGEB4O15481 346 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 PPIHO43447 177 aaKnown RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 RP2O75695 350 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 TNFRSF1AP19438 455 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 CFL1P23528 166 aaKnown RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 DCTDP32321 178 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 GPR6P46095 362 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 IL5RAQ01344 420 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 SLC34A1Q06495 639 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 EGR3Q06889 387 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 LOXL1Q08397 574 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 HFEQ30201 348 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 ZNF829Q3KNS6 432 aaPredicted RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 SPRNQ5BIV9 151 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 TTC23Q5W5X9 447 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 CLEC9AQ6UXN8 241 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 SSX6Q7RTT6 188 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 DHRSXQ8N5I4 330 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 OR8B12Q8NGG6 310 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 OR56B2PQ8NGI1 322 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 RHOXF1Q8NHV9 184 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 ITLN1Q8WWA0 313 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 Q96MT0 163 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 VCXQ9H320 206 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 RGCCQ9H4X1 137 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 FAM206AQ9NX38 181 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 TREM2Q9NZC2 230 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 IL19Q9UHD0 177 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 MRM2Q9UI43 246 aaKnown RBP10.48□□□□□ -0.73
SMAD3-205ENST00000558428 CACNG2Q9Y698 323 aa10.48□□□□□ -0.73
SMAD3-205ENST00000558428 IGHV4-61A0A0C4DH41 118 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 hCG_38984A0A1B0GV85 526 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 MLNRO43193 412 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 CLIC3O95833 236 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 LY6G6DO95868 133 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 HLA-DPB1P04440 258 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 KRT8P05787 483 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 CA6P23280 308 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 DDOSTP39656 456 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 TMEM33P57088 247 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 FAM3AP98173 230 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 OR8G1Q15617 311 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 PLEKHG7Q6ZR37 379 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 YIPF7Q8N8F6 280 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 CCL17Q92583 94 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 PBOV1Q9GZY1 135 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 RNPEPL1Q9HAU8 725 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 MRPL15Q9P015 296 aaKnown RBP10.47□□□□□ -0.73
SMAD3-205ENST00000558428 GTF2A1LQ9UNN4 478 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 NOP16Q9Y3C1 178 aaKnown RBP10.47□□□□□ -0.73
SMAD3-205ENST00000558428 ZFHX3Q15911 3703 aa10.47□□□□□ -0.73
SMAD3-205ENST00000558428 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.732e-8■■□□□ 12.1
SMAD3-205ENST00000558428 HIVEP2P31629 2446 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 A0A1B0GWJ7 208 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ACOD1A6NK06 481 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ANKRD30BLA7E2S9 258 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 CLDN25C9JDP6 229 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 F5H5P2 479 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 LOC110117498-PIK3R3F6TDL0 507 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 DBTP11182 482 aaKnown RBP10.46□□□□□ -0.73
SMAD3-205ENST00000558428 SRP9P49458 86 aaKnown RBP10.46□□□□□ -0.73
SMAD3-205ENST00000558428 GSK3AP49840 483 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 MMP16P51512 607 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ACTC1P68032 377 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ACTA1P68133 377 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ZNF85Q03923 595 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ZNF91Q05481 1191 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 SLC3A1Q07837 685 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 MFGE8Q08431 387 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-205ENST00000558428 TMEM249Q2WGJ8 235 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ZNF691Q5VV52 312 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 Q71RC1 249 aaPredicted RBP10.46□□□□□ -0.73
SMAD3-205ENST00000558428 COMMD2Q86X83 199 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 SETD9Q8NE22 299 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 APH1BQ8WW43 257 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 MEGF10Q96KG7 1140 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ADAT1Q9BUB4 502 aaKnown RBP10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ADI1Q9BV57 179 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 SLC22A4Q9H015 551 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 NARFLQ9H6Q4 476 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 AMBNQ9NP70 447 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 ZNF391Q9UJN7 358 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 PPP1R3CQ9UQK1 317 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 PCDHGB1Q9Y5G3 927 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 R4GMQ9 66 aa10.46□□□□□ -0.73
SMAD3-205ENST00000558428 MALRD1Q5VYJ5 2156 aa10.46□□□□□ -0.74
SMAD3-205ENST00000558428 IGHV3-64DA0A0J9YX35 117 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 A0A0U1RQV5 110 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 DAPL1A0PJW8 107 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 LRP5LA4QPB2 252 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 METTL15A6NJ78 407 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 GMDSO60547 372 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 SRSF10O75494 262 aaKnown RBP10.45□□□□□ -0.74
SMAD3-205ENST00000558428 SULT1C4O75897 302 aa10.45□□□□□ -0.74
SMAD3-205ENST00000558428 RPP14O95059 124 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms