RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CRABP1P29762 137 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SHMT2P34897 504 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 MAGEA3P43357 314 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 P2RY1P47900 373 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 IDH2P48735 452 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 RPS15AP62244 130 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 RIPPLY1Q0D2K3 151 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 C2orf80Q0P641 193 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 DYNC1I2Q13409 638 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 GGTLC2Q14390 218 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 MESDQ14696 234 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 OR4D1Q15615 310 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CHRFAM7AQ494W8 412 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SLC36A2Q495M3 483 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 VPS26BQ4G0F5 336 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 PIGGQ5H8A4 983 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 GCSAMLQ5JQS6 135 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 BEND3Q5T5X7 828 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 IDNKQ5T6J7 187 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 C9orf135Q5VTT2 229 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 C22orf42Q6IC83 251 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 APOBEC3HQ6NTF7 200 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 FAM199XQ6PEV8 388 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 ENPP6Q6UWR7 440 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 LRRN1Q6UXK5 716 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 LRRC31Q6UY01 552 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 TMPRSS11AQ6ZMR5 421 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ZNF836Q6ZNA1 936 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 AHSA2Q719I0 299 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ASCL5Q7RTU5 278 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 LINC01551Q86U37 167 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 UNC93AQ86WB7 457 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 PLA2G4DQ86XP0 818 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 WDFY1Q8IWB7 410 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 PUSL1Q8N0Z8 303 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 PDIK1LQ8N165 341 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 LINC01561Q8N1V8 128 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 STK40Q8N2I9 435 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 RIBC1Q8N443 379 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 C2orf73Q8N5S3 287 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 TMEM251Q8N6I4 163 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 OR4K2Q8NGD2 314 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 OR2D3Q8NGH3 330 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 OR56A4Q8NGH8 313 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 RNASEH2CQ8TDP1 164 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 CXorf40AQ8TE69 158 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 RASSF5Q8WWW0 418 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 BAALCQ8WXS3 180 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 MAFIPQ8WZ33 124 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CDS1Q92903 461 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 RPUSD4Q96CM3 377 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 JSRP1Q96MG2 331 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 OLFM3Q96PB7 478 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 TEAD3Q99594 435 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 DHRS9Q9BPW9 319 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 MICU1Q9BPX6 476 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 UCK2Q9BZX2 261 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CHRNA10Q9GZZ6 450 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 PCBD2Q9H0N5 130 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 PIGUQ9H490 435 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ANKRD19PQ9H560 264 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 KIR3DX1Q9H7L2 352 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 VCX3AQ9NNX9 186 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SLC17A5Q9NRA2 495 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 FBXO8Q9NRD0 319 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 AIG1Q9NVV5 245 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 BABAM2Q9NXR7 383 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 IL36GQ9NZH8 169 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 MAT2BQ9NZL9 334 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 KIF25Q9UIL4 384 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 GUCA1BQ9UMX6 200 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ASF1AQ9Y294 204 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 THSD7BQ9C0I4 1608 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 UBN2Q6ZU65 1347 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PCDH11XQ9BZA7 1347 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MTCL1Q9Y4B5 1905 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 A0A1B0GWB2 263 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NKX2-6A6NCS4 301 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 EFCAB10A6NFE3 127 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TVP23AA6NH52 213 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 VSTM2BA6NLU5 285 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MIF4GDA9UHW6 222 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 CLDN34H7C241 214 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 M0QZ92 97 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 PRMT5O14744 637 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 BIRC5O15392 142 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MSH4O15457 936 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 NUPL2O15504 423 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 TGOLN2O43493 480 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 ENSAO43768 121 aaKnown RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 CHST1O43916 411 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 MED6O75586 246 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 LRATO95237 230 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 WISP3O95389 354 aaPredicted RBP2.02□□□□□ -2.09
SPG11-206ENST00000558093 SNAP29O95721 258 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 SLC25A27O95847 323 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 TSPAN13O95857 204 aa2.02□□□□□ -2.09
SPG11-206ENST00000558093 IGF1P05019 195 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms