RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 KLBQ86Z14 1044 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 ELMOD2Q8IZ81 293 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 OR5AS1Q8N127 324 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 OR2G2Q8NGZ5 317 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 OR51E1Q8TCB6 317 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 REPIN1Q9BWE0 567 aaKnown RBP18.2■□□□□ 0.5
CASC4-204ENST00000557945 OPA3Q9H6K4 179 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 ST6GALNAC2Q9UJ37 374 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 LRCH1Q9Y2L9 728 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 PMF1-BGLAPU3KQ54 211 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 FBN2P35556 2912 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 A0A0U1RQV5 110 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 M0R233 179 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 SELEP16581 610 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 CD53P19397 219 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 KITLGP21583 273 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 GABARAPL2P60520 117 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 RNLSQ5VYX0 342 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 PRSS48Q7RTY5 328 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 PRSS35Q8N3Z0 413 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 NANOGP1Q8N7R0 232 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 BHLHE23Q8NDY6 225 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 PIGTQ969N2 578 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 RNF166Q96A37 237 aaPredicted RBP18.19■□□□□ 0.5
CASC4-204ENST00000557945 SPSB4Q96A44 273 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 LYZL4Q96KX0 146 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 MND1Q9BWT6 205 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 CACNG6Q9BXT2 260 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 GPR84Q9NQS5 396 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 BABAM2Q9NXR7 383 aa18.19■□□□□ 0.5
CASC4-204ENST00000557945 PLSCR5A0PG75 271 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 P2RY10O00398 339 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 DNASE1P24855 282 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 CDKN1AP38936 164 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 KIR3DL2P43630 455 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 GTF2A1P52655 376 aaPredicted RBP18.18■□□□□ 0.5
CASC4-204ENST00000557945 WNT4P56705 351 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 NANOS3P60323 173 aaKnown RBP18.18■□□□□ 0.5
CASC4-204ENST00000557945 FDX2Q6P4F2 183 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 HAVCR2Q8TDQ0 301 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 FAM71F1Q96KD3 344 aaPredicted RBP18.18■□□□□ 0.5
CASC4-204ENST00000557945 CXorf56Q9H5V9 222 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 FRRS1LQ9P0K9 344 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 ZNF391Q9UJN7 358 aa18.18■□□□□ 0.5
CASC4-204ENST00000557945 hCG_38984A0A1B0GV85 526 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 CD300LBA8K4G0 201 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 NAT2P11245 290 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 GSK3AP49840 483 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 FAM3AP98173 230 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 ALKBH1Q13686 389 aaKnown RBP18.17■□□□□ 0.5
CASC4-204ENST00000557945 IRF3Q14653 427 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 VRK1Q99986 396 aaPredicted RBP18.17■□□□□ 0.5
CASC4-204ENST00000557945 SOX7Q9BT81 388 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 TRIM36Q9NQ86 728 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 FBXO9Q9UK97 447 aaPredicted RBP18.17■□□□□ 0.5
CASC4-204ENST00000557945 IQCF6A8MYZ5 107 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 TGM4P49221 684 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 CCR9P51686 369 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 CHN2P52757 468 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 CDH15P55291 814 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 XAF1Q6GPH4 301 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 CDH24Q86UP0 819 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 ZCCHC24Q8N2G6 241 aaKnown RBP18.17■□□□□ 0.5
CASC4-204ENST00000557945 ZNF676Q8N7Q3 588 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 OR56B2PQ8NGI1 322 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 IGFBPL1Q8WX77 278 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 GTF3AQ92664 365 aaKnown RBP18.17■□□□□ 0.5
CASC4-204ENST00000557945 MSL2Q9HCI7 577 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 CYSLTR2Q9NS75 346 aa18.17■□□□□ 0.5
CASC4-204ENST00000557945 POLQO75417 2590 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 TRBV2A0A0J9YWF9 115 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 A0A1B0GVI7 797 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 H3BSH0 61 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 LALBAP00709 142 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 UBCP0CG48 685 aaKnown RBP18.16■□□□□ 0.5
CASC4-204ENST00000557945 LIPAP38571 399 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 MAP2K4P45985 399 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 PPOXP50336 477 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 ZNF81P51508 661 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 MMP15P51511 669 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 MED22Q15528 200 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 RDH10Q8IZV5 341 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 ZNF485Q8NCK3 441 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 OR8G5Q8NG78 346 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 TPK1Q9H3S4 243 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 MS4A5Q9H3V2 200 aa18.16■□□□□ 0.5
CASC4-204ENST00000557945 CGGBP1Q9UFW8 167 aaPredicted RBP18.16■□□□□ 0.5
CASC4-204ENST00000557945 OVOL3O00110 214 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 SPRY3O43610 288 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 LILRA1O75019 489 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 IGLV3-1P01715 115 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 DDOSTP39656 456 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 CDK5R1Q15078 307 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 SPHARQ15513 63 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 KCTD21Q4G0X4 260 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 CCDC58Q4VC31 144 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 ZMAT1Q5H9K5 638 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 RPL22L1Q6P5R6 122 aaKnown RBP18.15■□□□□ 0.5
CASC4-204ENST00000557945 ZFP41Q8N8Y5 198 aa18.15■□□□□ 0.5
CASC4-204ENST00000557945 OR5M11Q96RB7 305 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms