RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 KCTD20Q7Z5Y7 419 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 ZNF525Q8N782 197 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 MRPL48Q96GC5 212 aaKnown RBP21.75■■□□□ 1.07
SMAD6-202ENST00000557916 DIRC2Q96SL1 478 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 MYCBPQ99417 103 aaPredicted RBP21.75■■□□□ 1.07
SMAD6-202ENST00000557916 ANKRD60Q9BZ19 345 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 ERVK13-1Q9NX77 482 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 NUFIP1Q9UHK0 495 aaKnown RBP21.75■■□□□ 1.07
SMAD6-202ENST00000557916 SNX5Q9Y5X3 404 aa21.75■■□□□ 1.07
SMAD6-202ENST00000557916 VPS13CQ709C8 3753 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 LILRA1O75019 489 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 FAM20BO75063 409 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 HPXP02790 462 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 ADH4P08319 380 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 TACSTD2P09758 323 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 DAOP14920 347 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 MYF6P23409 242 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 ACTA2P62736 377 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 ACTG2P63267 376 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 GALEQ14376 348 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 SPNS3Q6ZMD2 512 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 OR13G1Q8NGZ3 307 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 PPP1R14AQ96A00 147 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 Q96MF0 132 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 RHNO1Q9BSD3 238 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 ALG8Q9BVK2 526 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 MOB1AQ9H8S9 216 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 G6PC2Q9NQR9 355 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 DECR2Q9NUI1 292 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 ACOXLQ9NUZ1 547 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 ZNF391Q9UJN7 358 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 OR52A1Q9UKL2 312 aa21.74■■□□□ 1.07
SMAD6-202ENST00000557916 TPD52L2O43399 206 aaKnown RBP21.73■■□□□ 1.07
SMAD6-202ENST00000557916 NCR1O76036 304 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 DCKP27707 260 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 OR12D2P58182 307 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 FAM209AQ5JX71 171 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 BCL2L15Q5TBC7 163 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 CLEC2AQ6UVW9 174 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 BPIFB6Q8NFQ5 453 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 OR2Z1Q8NG97 314 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 OR56B2PQ8NGI1 322 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 UBASH3BQ8TF42 649 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 RORBQ92753 470 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 GGHQ92820 318 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 SLC30A2Q9BRI3 323 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 PLCXD1Q9NUJ7 323 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 TMEM100Q9NV29 134 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 ITPR3Q14573 2671 aa21.73■■□□□ 1.07
SMAD6-202ENST00000557916 A0A0U1RQV5 110 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 hCG_38984A0A1B0GV85 526 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 J3QLW9 94 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 XPNPEP2O43895 674 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 ZNF19P17023 458 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 GSK3AP49840 483 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 DSCR9P59020 149 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 DNM1P46Q6ZS02 220 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 ELMOD3Q96FG2 381 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 LYZL4Q96KX0 146 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 ZNF649Q9BS31 505 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 JAM3Q9BX67 310 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 MYOZ1Q9NP98 299 aaPredicted RBP21.72■■□□□ 1.07
SMAD6-202ENST00000557916 RAB26Q9ULW5 256 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 EFCAB10A6NFE3 127 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 TNFSF4P23510 183 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 DDOSTP39656 456 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 PSMB10P40306 273 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 C6orf141Q5SZD1 244 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 CATSPERDQ86XM0 798 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 ELMOD2Q8IZ81 293 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 OR51E1Q8TCB6 317 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 TMEM80Q96HE8 168 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 C4orf36Q96KX1 117 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 EGLN1Q9GZT9 426 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 SAP30LQ9HAJ7 183 aa21.72■■□□□ 1.07
SMAD6-202ENST00000557916 DIMT1Q9UNQ2 313 aaKnown RBP21.72■■□□□ 1.07
SMAD6-202ENST00000557916 TTRP02766 147 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 CD55P08174 381 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 CSF3P09919 207 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 PIPP12273 146 aaPredicted RBP21.71■■□□□ 1.07
SMAD6-202ENST00000557916 PDLIM4P50479 330 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 TNFAIP6P98066 277 aaPredicted RBP21.71■■□□□ 1.07
SMAD6-202ENST00000557916 CARTPTQ16568 116 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 COMMD2Q86X83 199 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 SYS1Q8N2H4 156 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 OR10AD1Q8NGE0 317 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 FAM168AQ92567 244 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 ZNF184Q99676 751 aaPredicted RBP21.71■■□□□ 1.07
SMAD6-202ENST00000557916 SOX7Q9BT81 388 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 GPR84Q9NQS5 396 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 CNOT2Q9NZN8 540 aaKnown RBP21.71■■□□□ 1.07
SMAD6-202ENST00000557916 MRPL15Q9P015 296 aaKnown RBP21.71■■□□□ 1.07
SMAD6-202ENST00000557916 PSORS1C1Q9UIG5 152 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 SLC22A13Q9Y226 551 aa21.71■■□□□ 1.07
SMAD6-202ENST00000557916 LYNX1G3V0Z9 82 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 H0YL77 283 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 LIMS3P0CW19 117 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 LIMS4P0CW20 117 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 LYNX1P0DP58 116 aa21.7■■□□□ 1.06
SMAD6-202ENST00000557916 CSNK2BP67870 215 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms